Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0351 ATGGCAGTTCCAGTTATTGATTTTTCAAAGCTGAATGGAGAAGAAAGAGCCATAACTATGGCACAGATCGCTAATGGGTGTGAAGAGTGGGGATTTTTTCAGTTGATCAACCATGGCATTCCAGAGGAGCTCCTTGAGAGGGTGAAGAAGGTTTCATCTGAGTTCTATAAGCTGGAAAGAGAGAAGGATTTCAAGAACTCCACATCACTCGGCGATTTAGTTGAAAAGAAGAGCAGTGAAAAGCTGGAGCATGTGGATTGGGAGGATGTTATCACTCTCCTTGATGATAATGAATGGCCTGAAAGAACACCAGGCTTCAGGGAAACCATGGCGGAATACCGGGCCGAGTTAAAGAAACTAGCAGAGAAGTTGATGGAGGTGATGGATGAGAATCTTGGCATACCAAAAGGATACATCAAAAAGGCACTGAATGGTGGAGATGGAGACAATGCCTTTTTTGGCACCAAGGTGAGCCACTACCCTCCCTGTCCTAATCCAGAGCTTGTGAAGGGTCTTCGAGCTCACACCGACGCAGGCGGTGTCATCCTACTCTTCCAAGATGACAAGGTTGGTGGCCTTCAGATGCTGAAAGAAGGGCAATGGATTGATGTGCAGCCTTTGCCAAATGCCATTGTGATCAACACTGGTGATCAGATTGAGGTGCTGAGCAATGGTAGATACAAGAGTTGCTGGCACAGGGTTCTGGCCACACCAGATGGGAACAGAAGATCAATTGCATCCTTCTATAACCCTTCATTCAAGGCCACAATTTTCCCTGCACCACAACTTGTGGAGAAACAAGACCAACAAGTGGATGACACTTATCCTAAGTTTGTTTTTGGTGACTACATGTCTGTCTATGCTGAGCAGAAGTTCCTTCCTAAGGAACCAAGGTTCCGAGCTGTTAGGGCCATGTGA 918 0.463 MAVPVIDFSKLNGEERAITMAQIANGCEEWGFFQLINHGIPEELLERVKKVSSEFYKLEREKDFKNSTSLGDLVEKKSSEKLEHVDWEDVITLLDDNEWPERTPGFRETMAEYRAELKKLAEKLMEVMDENLGIPKGYIKKALNGGDGDNAFFGTKVSHYPPCPNPELVKGLRAHTDAGGVILLFQDDKVGGLQMLKEGQWIDVQPLPNAIVINTGDQIEVLSNGRYKSCWHRVLATPDGNRRSIASFYNPSFKATIFPAPQLVEKQDQQVDDTYPKFVFGDYMSVYAEQKFLPKEPRFRAVRAM 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0351 305 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5-LIKE 2 303 - -
Aed10g0351 305 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 151 251 IPR005123 -
Aed10g0351 305 Coils Coil 110 130 - -
Aed10g0351 305 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 303 - -
Aed10g0351 305 Gene3D - 2 305 IPR027443 -
Aed10g0351 305 Pfam 2OG-Fe(II) oxygenase superfamily 158 251 IPR044861 -
Aed10g0351 305 Pfam non-haem dioxygenase in morphine synthesis N-terminal 3 96 IPR026992 -
Aed10g0351 305 SUPERFAMILY Clavaminate synthase-like 2 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0351 Aed-Chr10 2834027 2835967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0351 1 268 Glycosyltransferase AT5G59530 32.986 5.79e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0351 K05933 - gmx:100790622 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0351 10 2834027 2835967 Aed10g0351 10 2834027 2835967 ECH