Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0344 ATGAGTTCCACTATATATATGATGTGGACTTATTCATTCAAGCGACACACAACAGCTATTAATTCTAGCTCTTCTGCACTATTTGTAGCAGAACTGCAGCATAGTAAAAGAAAGAAAGCCTCCAAAACAAGATGGTTGAGATGGATGGCGTTGGCAGCAAGTATCATCAACAAGGAATCTCCAAGGACGGTGTGGACTTCAAGTGCACACATTATAACGGCAGTGATTGGGTCTGGTGTGCTGTCTCTGGCTTGGGCTATAGCTCAGCTTGGATGGGTTGCTGGTCCTATTGTCATGGCTATCTTTTCTGCCATCACTTACTACACAGCCACTCTTCTCTCTGATTGTTATAGAACCGGTGACCCTCTCACTGGCAAGAGAAACTACACTTACATGGATGCTATTCATTCTAACTTTGGTGGAGGTAGCTATAAGGTCAAGCTGTGTGGGCTGGTTCAGTATATTAACCTTTTTGGAGTCGCCGTTGGTTACACTATAGCAGCTTCCATTAGCATGATGGCAATCGAAAGATCTAATTGTTTCCACAAGAGTGGAGGGAAAGATCCATGTCATATGAACAGCAACATGTACATGATTTCATTTGGTATTGTGGAAATAATTTTCTCACAAATTCCGAACTTCGATCAATTGTGGTGGCTCTCCATTGTAGCTGCTGTCATGTCCTTCACATACTCCACTATTGGCCTAGGCCTTGGTATTGGAAAAGTTATTGGAAACAGAAGAGTTAAGGGAAGCCTAACCGGGATAACAATTGGTACCGTGACACCAAGTGGTACCGTGACACAGACTGATAAAGACACGGTGAAATCCCCTCCAGCAGAGTCAAAAACAATGAGGAAGGCCACTTTCATCAGTGTTGCAGTAACGAGCATTTTCTACATACTTTGTGGCTGCTTTGGCTATGCTGCTTTTGGAGATGCAAGCCCTGGAAACCTTCTCACTGGTTTTGGCTTCTACAACCCATACTGGCTCCTTGACATAGCTAATGCTGCCATAGTGATCCACCTTGTTGGTTCATACCAAGTTTACTGCCAGCCCCTCTTTGCTTTCGTTGAGAAACATGTGGCGCGTATATTCCCAGATAGTGATTTAGTGAACAAAGATATTGAAATTCCAATCCCTGGTTTCAGTCCCTACAAGCTCAACCTCTTCAGATTGGTTTGGAGGACAATGTTTGTAATGGTGAGCACTGTGATATCAATGCTCCTCCCATTCTTCAATGACATAGGAGGACTTCTTGGAGCATTTGGATTTTGGCCCCTTACTGTGTATTTCCCAGTGGAGATGTACATTATTCAAAAGAGAATACCAAAGTGGAGCACAAAGTGGATCTGCCTCCAAATACTTAGCATTACTTGCCTTTTGATGACTATAGGAGCTGCAGCTGGATCTATTGCTGGGATTGCCATTGATCTTCAGACTTACAAGCCTTTCAAGACCAATTATTGA 1470 0.4327 MSSTIYMMWTYSFKRHTTAINSSSSALFVAELQHSKRKKASKTRWLRWMALAASIINKESPRTVWTSSAHIITAVIGSGVLSLAWAIAQLGWVAGPIVMAIFSAITYYTATLLSDCYRTGDPLTGKRNYTYMDAIHSNFGGGSYKVKLCGLVQYINLFGVAVGYTIAASISMMAIERSNCFHKSGGKDPCHMNSNMYMISFGIVEIIFSQIPNFDQLWWLSIVAAVMSFTYSTIGLGLGIGKVIGNRRVKGSLTGITIGTVTPSGTVTQTDKDTVKSPPAESKTMRKATFISVAVTSIFYILCGCFGYAAFGDASPGNLLTGFGFYNPYWLLDIANAAIVIHLVGSYQVYCQPLFAFVEKHVARIFPDSDLVNKDIEIPIPGFSPYKLNLFRLVWRTMFVMVSTVISMLLPFFNDIGGLLGAFGFWPLTVYFPVEMYIIQKRIPKWSTKWICLQILSITCLLMTIGAAAGSIAGIAIDLQTYKPFKTNY 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0344 489 PANTHER AMINO ACID CARRIER 60 260 - -
Aed10g0344 489 Pfam Transmembrane amino acid transporter protein 62 475 IPR013057 -
Aed10g0344 489 PANTHER AMINO ACID CARRIER 272 483 - -
Aed10g0344 489 PANTHER OS05G0424000 PROTEIN-RELATED 60 260 - -
Aed10g0344 489 PANTHER OS05G0424000 PROTEIN-RELATED 272 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0344 Aed-Chr10 2786492 2790493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0344 63 489 Organic Solute Cotransporters AT1G77380 70.179 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0344 K24917 - gmx:100792389 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0344 10 2786492 2790493 Aed10g0344 10 2786492 2790493 ECH