Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0334 ATGAAGTTATTGCATTCGAGAGCCATCCAAGTCCCGGCGATGACGAAGAAGAGAAAAAGATCCCCAAAACATACCCCTCCCTCAACGCCCCCAACTCCACAGACCCAAGCCCGCCACTCCTTCAACACATCAAAGGCCCGGGCCTGGGCCCCTCTCAACCTCAGCCGCGACGAACTCTCCCTGCCCCTCACCTTCCCCACGGGCCAAACCTTCCGCTGGAAAAACACCGCCCCTTCCCAATACACCGGCGTCGTTGGGCCCCACCTCATTTCCCTCAAGCACCTCCAAAACGGCGACGTTTCCTACTGCCTCCACTCCCACTCCCACCCCGACAACGCCGAAACGGCCCTCCTCGACTTCCTAAACGCTGCCGTTTCCCTCGCCGACTTATGGAAAACGTTTTCCGCTTCCGACGCGAGGTTCGCCGAGCTGTCGCGCCACTTAAGTGGCGCCCGAGTCCTCCGGCAAGACCCTTTCGAGTGTTTGATTCAGTTTCTCTGCTCTTCCAACAACAACATCGGAAGAATCACGAAGATGGTGAACTACGTGTCGTCCCTGGGAACTCACGTGGGAGACGTTGAAGGTTTTCAGTTCCACGCTTTCCCTTCTTTGGAACAGCTTTCCTCCGTCTCCGAGCAACAACTCAGAGACGCCGGTTTCGGTTACAGGGCTAAATATATAGTTGGTACGGTTAATGCTTTGCAATCAAAACCCGGTGGAGGGGAAGAATGGCTTCGTTCTCTTCGTATAATGGAACTTCGAGATGTTATATCTGCACTTTCTACGTTACCCGGTGTGGGTCCTAAAGTGGCTGCTTGCATTGCTCTCTTCTCGCTGGATCAGCACCATGCCGTTCCTGTTGACACACACGTGTGGCGGATTGCTACGAAGTATCTCTTGCCTGAGCTTGCAGGTTCCCAGTTGACACCAAAGCTCTGCGATCGTGTTGCAGAGGCTTTTGTAACCAAATATGGCAAATATGCTGGTTGGGCGCAGACTCTGTTGTTCATAGCTGAATTGCCTACACAAAAGGCCATTCTACCTTCACATTTGCAGACTATTAAACAACGCAATGCTGCAAAGATAGAAGGCAGTGAATGA 1101 0.5295 MKLLHSRAIQVPAMTKKRKRSPKHTPPSTPPTPQTQARHSFNTSKARAWAPLNLSRDELSLPLTFPTGQTFRWKNTAPSQYTGVVGPHLISLKHLQNGDVSYCLHSHSHPDNAETALLDFLNAAVSLADLWKTFSASDARFAELSRHLSGARVLRQDPFECLIQFLCSSNNNIGRITKMVNYVSSLGTHVGDVEGFQFHAFPSLEQLSSVSEQQLRDAGFGYRAKYIVGTVNALQSKPGGGEEWLRSLRIMELRDVISALSTLPGVGPKVAACIALFSLDQHHAVPVDTHVWRIATKYLLPELAGSQLTPKLCDRVAEAFVTKYGKYAGWAQTLLFIAELPTQKAILPSHLQTIKQRNAAKIEGSE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0334 366 Gene3D - 129 340 IPR023170 -
Aed10g0334 366 SUPERFAMILY TATA-box binding protein-like 41 156 - -
Aed10g0334 366 SMART endo3end 167 340 IPR003265 GO:0006284
Aed10g0334 366 MobiDBLite consensus disorder prediction 1 42 - -
Aed10g0334 366 SUPERFAMILY DNA-glycosylase 157 337 IPR011257 GO:0003824|GO:0006281
Aed10g0334 366 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 48 353 - -
Aed10g0334 366 Pfam HhH-GPD superfamily base excision DNA repair protein 163 298 IPR003265 GO:0006284
Aed10g0334 366 Gene3D Hypothetical protein; domain 2 157 281 - -
Aed10g0334 366 PANTHER N-GLYCOSYLASE/DNA LYASE 48 353 - -
Aed10g0334 366 Gene3D - 35 121 - -
Aed10g0334 366 CDD ENDO3c 159 337 IPR003265 GO:0006284
Aed10g0334 366 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 52 162 IPR012904 GO:0003684|GO:0006289|GO:0008534
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0334 Aed-Chr10 2684346 2686775 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0334 K03660 - gmx:100789749 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0334 10 2684346 2686775 Aed10g0334 10 2684346 2686775 ECH