Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0328 ATGTGGTGGTGTTTTTCCTTTGCTTTCATTTTAACGGCGTTTATTGGCACCGTCCATGGTCGCGGCAATGTCACCTACGATGGAAGATCCTTAATCATTGATGGTCAACATAAAATCTTCTTCTCTGGTTCAATTCATTATCCCCGTAGCACTCCTCAGTATGACTTTAGAGGAAGGCGTAATATAATAAGATTCATCAAGGAAATTCAAGCACAAGGTTTATACGTAACCCTCCGAGTTGGACCATACATTGAGAGTGAATGCACTTATGGGGGTCTACCGTTATGGTTACATGATGTTCCTGGTATCGTATTCAGATCTGACAATGAGCAATTTAAGTTTCACATGCAAAGGTTCACTGCTAAAATAGTCAACTTGAAAGGACGGTCCTATATTCGTTGGGCTGCCCAAATGGCCTTGGGATTCCAAACCGGTGTGCCTTGGGTGATGTGCAAGCAAGATAATGCTCCTGATCCCGTGATAAACACATGCAATGGCATGCAGTGTGGAAAAACTTTTAAGGGACCTAACTCGCCTAACAAGCCTTCACTGTGGACAGAGAATTGGACAAGTTTTTACCAAGTCTTTGGTGAAGTACCATACATAAGATCAGCTGAAGACATTGCATATAATGTTGCCTTGTTCATTGCAAAGAGAGGAAGCTATGTCAATTACTACATGGTTTGGTTAGGGAACCAAAATGGAGCCATCTTAAGGAGCTTCATGCGGCAATCAAGTCATGTTCAAAATCTCTACTTTATGGAACTCAAACTAGCTTCAGCTTGGGCACACAACAAAACCTCAATAGAATGTGCTGCCTTCCTGGAAAATAGTGAAGATCGGAGTATCACAATCCAATTTCAAAATATTCCATATCAATTACCTCCCAAGTCAATCAGTGTTCTACCAGACTGCAAGAATGTAGCCTTCAACACTGGCAAGGTAAGCACACAAAATGGCAGAGCAATGAAGTCACAGTTACAATTCAATTCAGCTGAAAAATGGAAAGTGTACAAAGAAGCCATCCCCAGCTTTGACGATACTTCAATAAGAGCAAATACACTATTAGATCAAATCGGCACAGCAAAAGATACATCTGACTATATGTGGTACACACTCAGGCTTTATGACAACTCTCCCAATGCTCAATTTCTTAGTGCATACAGCCAGGGACATGTTTTGCATGCCTTCGTCAATGGAAATTTAAACAAACTCAATCTGATAAACGGGATGAACAATATTTCTTTCCTCAGTGCAACGGTTGGATTGCCGAACTCGGGAGCATATCTAGAGCGCAGAGTTGCTGGTTTGCGTAGTCTGAACGTTCAAGGCAGAGATTTCACTAATCAAGCATGGGGATATCAGGTTGGGTTGTTAGGGGAAAAATTGCAAATCTACACAGCTAGTGGATCAAGTAAAGTTCAGTGGCAAAGTTTCCAAAGCTCTACTAAGCCACTCACATGGTATAAGACCACATTCGATGCACCCGTGGGAAACGATCCTGTAGTGCTTAACCTTGGTTCTATGGGAAAGGGTTATACTTGGGTTAATGGCCAGGGTATCGGCCGATATTGGGTATCTTTCCACACACCACAGGGAACTCCTTCACAGAAATGGTATCACATACCCCGATCCCTCCTAAAATCTACTGGGAACCTACTAGTTCTAATAGAAGAAGAAATTGGGAGTCCACTGGGGATCACACTAGACACAGTTTACATCACATCACCGTGA 1734 0.4233 MWWCFSFAFILTAFIGTVHGRGNVTYDGRSLIIDGQHKIFFSGSIHYPRSTPQYDFRGRRNIIRFIKEIQAQGLYVTLRVGPYIESECTYGGLPLWLHDVPGIVFRSDNEQFKFHMQRFTAKIVNLKGRSYIRWAAQMALGFQTGVPWVMCKQDNAPDPVINTCNGMQCGKTFKGPNSPNKPSLWTENWTSFYQVFGEVPYIRSAEDIAYNVALFIAKRGSYVNYYMVWLGNQNGAILRSFMRQSSHVQNLYFMELKLASAWAHNKTSIECAAFLENSEDRSITIQFQNIPYQLPPKSISVLPDCKNVAFNTGKVSTQNGRAMKSQLQFNSAEKWKVYKEAIPSFDDTSIRANTLLDQIGTAKDTSDYMWYTLRLYDNSPNAQFLSAYSQGHVLHAFVNGNLNKLNLINGMNNISFLSATVGLPNSGAYLERRVAGLRSLNVQGRDFTNQAWGYQVGLLGEKLQIYTASGSSKVQWQSFQSSTKPLTWYKTTFDAPVGNDPVVLNLGSMGKGYTWVNGQGIGRYWVSFHTPQGTPSQKWYHIPRSLLKSTGNLLVLIEEEIGSPLGITLDTVYITSP 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0328 577 Pfam Glycosyl hydrolases family 35 53 125 IPR031330 -
Aed10g0328 577 Gene3D - 458 573 - -
Aed10g0328 577 Gene3D Glycosidases 54 125 - -
Aed10g0328 577 Gene3D Glycosidases 17 53 - -
Aed10g0328 577 SUPERFAMILY (Trans)glycosidases 22 233 IPR017853 -
Aed10g0328 577 PANTHER BETA-GALACTOSIDASE 257 575 - -
Aed10g0328 577 PRINTS Glycosyl hydrolase family 35 signature 484 498 IPR001944 GO:0004553|GO:0005975
Aed10g0328 577 PRINTS Glycosyl hydrolase family 35 signature 511 527 IPR001944 GO:0004553|GO:0005975
Aed10g0328 577 PRINTS Glycosyl hydrolase family 35 signature 34 51 IPR001944 GO:0004553|GO:0005975
Aed10g0328 577 PANTHER BETA-GALACTOSIDASE 127 242 - -
Aed10g0328 577 PANTHER BETA-GALACTOSIDASE 53 126 - -
Aed10g0328 577 PANTHER BETA-GALACTOSIDASE 8 53 - -
Aed10g0328 577 SUPERFAMILY Galactose-binding domain-like 451 574 IPR008979 -
Aed10g0328 577 Pfam Beta-sandwich domain in beta galactosidase 259 315 IPR041392 -
Aed10g0328 577 PANTHER BETA-GALACTOSIDASE RELATED 127 242 IPR001944 GO:0004553|GO:0005975
Aed10g0328 577 PANTHER BETA-GALACTOSIDASE RELATED 53 126 IPR001944 GO:0004553|GO:0005975
Aed10g0328 577 PANTHER BETA-GALACTOSIDASE RELATED 8 53 IPR001944 GO:0004553|GO:0005975
Aed10g0328 577 Gene3D Glycosidases 126 284 - -
Aed10g0328 577 PANTHER BETA-GALACTOSIDASE RELATED 257 575 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0328 Aed-Chr10 2631414 2637841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0328 4 575 Glycoside Hydrolase AT5G63800 45.157 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0328 - - gmx:100789220 967.992