Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0322 ATGAAGAAAATCCGCAACTCGATCCTACTACTCTTATCAATCGTTCTGGCAGCCTCGACAGCGGTTTCATCCGCGGAGCCGATTCCCTCCGCCGCCTACGAGCGCGTGCTGTTGCCGGAGCGGCGATGCCAGAAAACGGTGTTGGAGAACAAGACGCGGGGAGGTACCTTGGCGTCGGCGGATTGCGAGGGGTGGAGTTCAGAGGCAGTGATGAAAGTGGCGCGGCGGGCGGAGACGGCGGAGTGGTTGAAAAAGATTCGGCGGAAGATCCACGCGAATCCGGAGCTGGCGTTTGAGGAAATCGAGACGAGTCGTTTGATAAGAGAGGAGTTGGATCTGATGGAAGTTAGTTATCGGTACCCTCTCGCCAAGACCGGTATTCGAGCCTGGATCGGCACTGGGGGTCCGCCTTTTGTTGCGATCAGAGCTGACATGGACGCACTTCCCATTCAGGAAGCTGTGGAATGGGAGTACAAGTCTAAAGTTGCCGGCAAAATGCATGCTTGTGGGCACGACGCACATGTGGCTATGCTAATCGGCGCTGCCAAGATTTTGAAAACTCGAGAGCATTTATTAAAGGGAACTGTAATTCTGTTATTCCAGCCAGCAGAGGAAGCTGGTAATGGAGCAAAGAGAATGATGCAGGACGGTGCATTGGAGGACGTGGAGGCGATATTTGCAGTTCATGTATCCCATGAACATCCAACTGGTATAATTGGGTCAAGGCCTGGACCCCTCCTTGCTGGTTGTGGATTCTTCAGAGCTGTCATTAGTGGCAAAAAGGGTCTTGCTTCCAATCCTCACCGTTCTGTCGATCCTGTTTTGGCCGCTTCAGCTGCAGTTATAAGCTTACAGGGTATTGTCTCCCGCGAAGCTAATCCTTTGGATTCTCAGGTTGTCTCTGTAACTTCGTTTAATGGAGGCAACAATCTTGACATGATACCCGACACTGTGTTCTTTGAAAAAGAGTACACTATTTACCCTCCGACAGTGAATGATGATCGAATGTATGAGCATGTGAAGAAGGTGTCGATCGATTTGTTGGGTCAGAAGAATTTCAGGGTAGTTCCACCTATGATGGGTGCTGAAGATTTCTCTTTCTACTCCGAGGTGGTTCCCTCAGCTTTCTTCTACATAGGGGTAAGGAATGAAACTTTGGGGTCTACTCATACGGGACACTCTCCATATTTCATGATTGATGAAGACGTTCTACCAATAGGTGCTGCTGTTCATGCTAGTATTGCAGAGAGGTACCTCATTCAACATGGTTGA 1272 0.4984 MKKIRNSILLLLSIVLAASTAVSSAEPIPSAAYERVLLPERRCQKTVLENKTRGGTLASADCEGWSSEAVMKVARRAETAEWLKKIRRKIHANPELAFEEIETSRLIREELDLMEVSYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKTREHLLKGTVILLFQPAEEAGNGAKRMMQDGALEDVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGKKGLASNPHRSVDPVLAASAAVISLQGIVSREANPLDSQVVSVTSFNGGNNLDMIPDTVFFEKEYTIYPPTVNDDRMYEHVKKVSIDLLGQKNFRVVPPMMGAEDFSFYSEVVPSAFFYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAVHASIAERYLIQHG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0322 423 TIGRFAM amidohydrolases: amidohydrolase 85 320 IPR017439 GO:0016787
Aed10g0322 423 CDD M20_IAA_Hyd 83 419 IPR044757 GO:0009850|GO:0016787
Aed10g0322 423 SUPERFAMILY Bacterial exopeptidase dimerisation domain 249 334 IPR036264 -
Aed10g0322 423 Pfam Peptidase family M20/M25/M40 140 416 IPR002933 GO:0016787
Aed10g0322 423 Gene3D Zn peptidases 74 305 - -
Aed10g0322 423 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 319 422 - -
Aed10g0322 423 Gene3D Zn peptidases 313 423 - -
Aed10g0322 423 PANTHER PEPTIDASE M20 FAMILY MEMBER 52 319 IPR017439 GO:0016787
Aed10g0322 423 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 52 319 - -
Aed10g0322 423 PIRSF Amidohydrol_AmhX 320 422 IPR017439 GO:0016787
Aed10g0322 423 PIRSF Amidohydrol_AmhX 70 327 IPR017439 GO:0016787
Aed10g0322 423 PANTHER PEPTIDASE M20 FAMILY MEMBER 319 422 IPR017439 GO:0016787
Aed10g0322 423 SUPERFAMILY Zn-dependent exopeptidases 77 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0322 Aed-Chr10 2573720 2579724 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0322 K21604 K14664 gmx:100800794 745.732