Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0319 ATGGCGAGTAGAGTTTTCTTCTTTGTGTTTGCACTTTCTCTACTTCTTCCTTTTCAGATCTCTGCGGAAGAAGCCTCGGAGACACCTGAGAAGGAGTTCGTGCTCACATTGGATCACTCTAACTTCTCCGACACTATCGCCAAGCACGATTTCATCGTCGTCGAGTTCTACGCTCCATGGTGTGGCCACTGTAAGAAGCTTGCTCCCGAGTTTGAGAAAGCTGCTTCTGTCTTGAGTAGTCAGGATCCTCCAGTTTTTTTGGCTAAAGTTGATGCCAATGAAGAGAAGAACAAAGAGATTGCAACACTATATGATGTTAAGGGGTACCCAACAATTAAGATTCTGAGAAATGGGGGAAAGGATGTTCAGGATTACAAAGGTCCCCGTGAAGCAGATGGCATCGTTGACTATGTGAAGAAACAAAGTGGTCCTGCTTCAACTGAAATCAAATCTGCTGATGAAGCTACTGCTTTGATTGGTGAAAACAAACTTGCTATTGTTGGAATTTTCCCCAAATTTTCTGGAGAGGAGTTTGATAACTTTTCTATCTTAGCAAAGAAGTTGCGTTCTGACTATGACTTAGGTCACACTCTGAATGCCAAGCACCTTCCAAGAGGAGACTCGTCAGTTTCTGGGCCCGTAGTTAGGCTATTCAAGCCATTCGATGAACTTTTTGTTGACTCCCAGGATTTCAATGTGGAAGCTCTAGAGAAATTTATCGAGGAATCTAGTGCTGAAGCTTTCAAATCAAAATACCGTGAAACTGCTGAGCTATATACACAACAGGGCATAAGCTTTTTGATCGGAGATGTTGAGTCTAGTGAAAATGCTTTCCAGTATTTTGGACTGAAGCAAGACCAAGCACCTCTAATTATCATACAACATAATGATGGGAAAAAGTTTTTAAAACCCAATTTGGAAGCTGACGACATTCCAACTTGGTTGAAGGCATACAAGGATGGTAATGTTGCACCATTTGTGAAGTCTGAACCCATTCCTGAAACTAACGATGAACCTGTTAAAGTGGTAGTTGGGAAAAGTCTCGACGACATTGTTTTCAAATCTGGGAAGAATGTTCTGCTGGAGTTTTATGCTCCCTGGTGTGGTCATTGCAAACACTTGGCTCCAATATTGGACGAAGTTGCTATCTCATATCAAAGTGACGCTGATGTTGTTATTGCAAAACTGGATGCAACTGCCAACGATGTCCCAGGTGATATCTTTGATGTCCAAGGTTATCCAACCCTCTACTTCAGATCAGCAAGTGGAAAGCTATCGCAATTCGAAGGTGGTAGGACCAAGGAAGACATCATAGGATACATCGAAAAGAACAGGGATAATAAACATGGTCAGCAAGAACAAGCTGCTGCTCCTAAAGAAGAAGAGCAAGAGAAGGGAAAAGATGAGCTTTGA 1413 0.4232 MASRVFFFVFALSLLLPFQISAEEASETPEKEFVLTLDHSNFSDTIAKHDFIVVEFYAPWCGHCKKLAPEFEKAASVLSSQDPPVFLAKVDANEEKNKEIATLYDVKGYPTIKILRNGGKDVQDYKGPREADGIVDYVKKQSGPASTEIKSADEATALIGENKLAIVGIFPKFSGEEFDNFSILAKKLRSDYDLGHTLNAKHLPRGDSSVSGPVVRLFKPFDELFVDSQDFNVEALEKFIEESSAEAFKSKYRETAELYTQQGISFLIGDVESSENAFQYFGLKQDQAPLIIIQHNDGKKFLKPNLEADDIPTWLKAYKDGNVAPFVKSEPIPETNDEPVKVVVGKSLDDIVFKSGKNVLLEFYAPWCGHCKHLAPILDEVAISYQSDADVVIAKLDATANDVPGDIFDVQGYPTLYFRSASGKLSQFEGGRTKEDIIGYIEKNRDNKHGQQEQAAAPKEEEQEKGKDEL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0319 470 SUPERFAMILY Thioredoxin-like 219 337 IPR036249 -
Aed10g0319 470 Pfam Thioredoxin-like domain 170 263 - -
Aed10g0319 470 PANTHER PROTEIN DISULFIDE ISOMERASE 22 244 - -
Aed10g0319 470 PANTHER PROTEIN DISULFIDE ISOMERASE 246 457 - -
Aed10g0319 470 PRINTS Thioredoxin family signature 52 60 - -
Aed10g0319 470 PRINTS Thioredoxin family signature 105 116 - -
Aed10g0319 470 PRINTS Thioredoxin family signature 60 69 - -
Aed10g0319 470 ProSiteProfiles Thioredoxin domain profile. 22 143 IPR013766 -
Aed10g0319 470 CDD PDI_b_family 146 242 - -
Aed10g0319 470 Gene3D Glutaredoxin 335 449 - -
Aed10g0319 470 Gene3D Glutaredoxin 19 141 - -
Aed10g0319 470 SUPERFAMILY Thioredoxin-like 34 144 IPR036249 -
Aed10g0319 470 SUPERFAMILY Thioredoxin-like 147 244 IPR036249 -
Aed10g0319 470 SUPERFAMILY Thioredoxin-like 305 445 IPR036249 -
Aed10g0319 470 PANTHER PROTEIN DISULFIDE-ISOMERASE 22 244 - -
Aed10g0319 470 PANTHER PROTEIN DISULFIDE-ISOMERASE 246 457 - -
Aed10g0319 470 TIGRFAM pdi_dom: protein disulfide-isomerase domain 38 141 IPR005788 GO:0003756
Aed10g0319 470 CDD PDI_a_PDI_a'_C 339 441 - -
Aed10g0319 470 CDD PDI_a_family 35 138 - -
Aed10g0319 470 MobiDBLite consensus disorder prediction 440 470 - -
Aed10g0319 470 Gene3D Glutaredoxin 244 334 - -
Aed10g0319 470 ProSitePatterns Thioredoxin family active site. 53 71 IPR017937 -
Aed10g0319 470 ProSiteProfiles Thioredoxin domain profile. 318 446 IPR013766 -
Aed10g0319 470 Gene3D Glutaredoxin 142 243 - -
Aed10g0319 470 ProSitePatterns Thioredoxin family active site. 360 378 IPR017937 -
Aed10g0319 470 CDD PDI_b'_family 241 319 - -
Aed10g0319 470 Pfam Thioredoxin 34 140 IPR013766 -
Aed10g0319 470 Pfam Thioredoxin 340 442 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0319 Aed-Chr10 2553540 2557029 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0319 K09580 - gmx:100170705 783.867