Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0318 ATGATGTCGTCGGGTAAGATTTCCATTAGCTTGGTTGTCGTGTTCACGTTCTCTCTCCTTACGTCGCCACTTCCTTCTCGAGTCTCCGCTGAAGAAGAATCGGTTCTAACTTTGGATCACTCTAACTTCTCCGACACTGTCAACAAGCACAATATCATCGTCGTTGAGTTCTACGCACCATGTCATGATCCTCCGGTTATTTTGGCAAAAATTGATGCCAATGAGGAGAAGAACAAAGAACTTGCATCACAATATGGTGTTAAGGGGTACCCAACAATTAAGATTCTGAGAAATGGGGGAAAGAATGTTCAAGAATACAAAGAGAAGTTACGTTCTGACTATGACTTTGGTCACACTCTGAATGCCAAACACCTTCCAAGAGGAGAATCATCAGTCACTGGGCCCATAGTTAGGTTATTCAAGCCATTTGACGAACTTTTTGTTGACTTCCAGGATTTCCATGTGGGAGCTCTAGAGAAATTTGTTGAAGAATCTAGTGTTCCTGTTGTGACTGTCTTTGACAATGATCTGAGAAATCACCCTTTTATTTCCAAATTCTTCAGCAGTCCTAATACAAAGGTAATGTTGTTTATCAACTTCACTGCTGAAGGTGCTGAATCTTTCAAATCAAAATACCAAGAAGCTGCTGAACAATATAGACAACATGGTTTAAGCTTTCTGGTAGGAGATGCAAAGTCTATTAAAGGTTCTTTCCAGTATTTTGGAGTGAAGGAAGACCAAGTACCTCTAATTCTGGTACAACATAATGATAAGAAGAAATTTTTTAAACCCAATTTGGAACCTGATCACATTTCAACTTGGTTGAAGGCATACAAGGATGGAAACATTGCCCCATATTTTATGTCTGAAACTATTCCTGAAGCTAACAATGAACCTGTTAAAGTGGTAGTTAGGGACAGTCTCCAGGACATAGTTTTCAACTCTGGGAAGAATGTTCTACTGGACTTTTATTCTCCCTGGTGTGGTTATTGCATAGAATTGGCTCCAATATTGGAGGAAGTTGCTGTCTCGTATCAAAGTGATGCTGATGTTATTATTGCGAAACTGGATGGAGTTGCCAACGATATTCCAAGAGAAATCTTTGAAGTCAAAGGTTATCCAACAGTGTACTTCAGGTCAGCAAGTGGAAAGATATCACTATACGATGGCAATAGGACCAAGGAAGACATCATAGAATTTATTGAAAAGAATCGAGATCATAAACCTGCTCAACAAGAACAACCAAAAGGACAAGATGAGCTTTGA 1266 0.3949 MMSSGKISISLVVVFTFSLLTSPLPSRVSAEEESVLTLDHSNFSDTVNKHNIIVVEFYAPCHDPPVILAKIDANEEKNKELASQYGVKGYPTIKILRNGGKNVQEYKEKLRSDYDFGHTLNAKHLPRGESSVTGPIVRLFKPFDELFVDFQDFHVGALEKFVEESSVPVVTVFDNDLRNHPFISKFFSSPNTKVMLFINFTAEGAESFKSKYQEAAEQYRQHGLSFLVGDAKSIKGSFQYFGVKEDQVPLILVQHNDKKKFFKPNLEPDHISTWLKAYKDGNIAPYFMSETIPEANNEPVKVVVRDSLQDIVFNSGKNVLLDFYSPWCGYCIELAPILEEVAVSYQSDADVIIAKLDGVANDIPREIFEVKGYPTVYFRSASGKISLYDGNRTKEDIIEFIEKNRDHKPAQQEQPKGQDEL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0318 421 Pfam Thioredoxin-like domain 107 276 - -
Aed10g0318 421 PANTHER PROTEIN DISULFIDE-ISOMERASE 13 60 - -
Aed10g0318 421 PANTHER PROTEIN DISULFIDE-ISOMERASE 108 413 - -
Aed10g0318 421 PANTHER PROTEIN DISULFIDE-ISOMERASE 61 107 - -
Aed10g0318 421 SUPERFAMILY Thioredoxin-like 184 297 IPR036249 -
Aed10g0318 421 CDD PDI_b_family 101 164 - -
Aed10g0318 421 CDD PDI_a_PDI_a'_C 299 401 - -
Aed10g0318 421 SUPERFAMILY Thioredoxin-like 105 175 IPR036249 -
Aed10g0318 421 ProSiteProfiles Thioredoxin domain profile. 278 406 IPR013766 -
Aed10g0318 421 Gene3D Glutaredoxin 64 116 - -
Aed10g0318 421 CDD PDI_b'_family 179 279 - -
Aed10g0318 421 Gene3D Glutaredoxin 156 294 - -
Aed10g0318 421 Gene3D Glutaredoxin 26 63 - -
Aed10g0318 421 CDD PDI_a_family 36 107 - -
Aed10g0318 421 SUPERFAMILY Thioredoxin-like 33 109 IPR036249 -
Aed10g0318 421 SUPERFAMILY Thioredoxin-like 297 408 IPR036249 -
Aed10g0318 421 Gene3D Glutaredoxin 295 409 - -
Aed10g0318 421 Pfam Thioredoxin 300 403 IPR013766 -
Aed10g0318 421 PANTHER PROTEIN DISULFIDE ISOMERASE 13 60 - -
Aed10g0318 421 PANTHER PROTEIN DISULFIDE ISOMERASE 108 413 - -
Aed10g0318 421 PANTHER PROTEIN DISULFIDE ISOMERASE 61 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0318 Aed-Chr10 2546846 2551124 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0318 K09580 - gmx:100170705 521.161