Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0304 ATGAACGCCATAGCCACTGCTGCACTTCTCTCTCTCCCTTTCTCCTCCGCCTTCTCCAGATCATCCAACCCTCACACCAAAAAGGGTTTGAAAGGAAGGTTTAGAGTGTTCGCTGTATATGGTGAGGAGATAGATAAGAAGAACGCATGGAGTGCGCTCTTTGACGTGGAGGATCCAAGATCCAAAGTGCCGCAGTATAAAGGAAAGTTTTTGGATGCTTATCAAGCCCTTGAAGTTGCAAGATATGATATTCAATACTGTGATTGGCGAGCTCGCCAAGACTTGCTTACCATCATGCTTCTCCATGAAAAGGTGGTGGAGGTTCTTAATCCTTTAGCTCGTGATTATAAGTCCATTGGCACCATGAAAAAGGATCTAGCAGAGTTGCAGGAAGAATTGGCACAGGCACACCAACAGGTTCATATATCTGAGGCAAGGGTGTCCACTGCTTTAGATAAACTAGCTTACATGGAAGAATTAGTAAATGATAAGTTGTTGCAAGAAAGAACCACAACTGAAGTTTCCCAGACATCCTCTTCTCTCAGTACTTCGTTTAAATCTGTAGATGTAGAAAAGAGAAGACCGCCACGAAAAAGCTTGGACATATCAGGTCCAGTTCAGTCATACCATCCACACTTGAAGAATTTCTGGTACCCTGTAGCTTTCTCTACTGGCTTGAAGGATGATACAATGGTCCCAATAGAATGTTTTGAGGAACCATGGGTCATCTTTAGAGGGAAAGATGGGAAGCCTGGATGTGTTCAGAACACCTGTGCACACAGAGCATGTCCTCTGCACCTTGGTTCTGTAAATGAGGGTCGAATCCAATGCCCTTACCATGGCTGGGAATATACTACTGATGGAAAGTGTGAGAAAATGCCATCTACTCGACTGCTAAATGTGAAGATAAAGTCATTGCCATGTTTTGAAAAGGAGGGTATGATCTGGGTTTGGCCTGGCGATGAACCCCCAACAGCTACCCTTCCATCTTTGCTACCTCCATCTGGGTTTGAAGTGCATGCTGAGATTGTCATGGAACTTCCCATCGAACATGGGTTACTTTTGGATAACCTTTTGGATCTAGCACATGCCCCTTTTACTCACACTTCAACTTTTGCCAAGGGATGGAGTGTTCCTAGTGGATTTCTTGGTCTCGTAGCTCATAGCATGGATTTGAACTTGCTCGCTCGCAGCTTGGTGAAATTTTTGACACCTGCATCTGGGCTACAAGGATACTGGGACCCCTATCCAATTGATATGGAGTTTCGGCCACCTTGCATGGTTTTATCAACCATTGGAATTTCAAAGCCTGGTAAACTGGAAGGACAAAACACCAGTCAGTGCGCCACACACCTGCACCAACTTCATGTCTGCTTACCATCTTCAAAACAAAAAACAAGATTGCTATACAGAATGTCACTGGATTTCGCTCCTGTGCTTAAGCACATTCCTTTAATGCAGCATCTATGGAGATATTTTGCAGAGCAGGTTTTAAACGAGGATCTACGGCTAGTGTTAGGGCAGCAAGAGCGGATGAACAATGGTGCAAATGTGTGGAATTTCCCAGTATCCTATGACAAGCTTGGTGTAAGGTACAGACTATGGAGAAATGCCTTGGAGCGTGGAAGTAACTAA 1635 0.4446 MNAIATAALLSLPFSSAFSRSSNPHTKKGLKGRFRVFAVYGEEIDKKNAWSALFDVEDPRSKVPQYKGKFLDAYQALEVARYDIQYCDWRARQDLLTIMLLHEKVVEVLNPLARDYKSIGTMKKDLAELQEELAQAHQQVHISEARVSTALDKLAYMEELVNDKLLQERTTTEVSQTSSSLSTSFKSVDVEKRRPPRKSLDISGPVQSYHPHLKNFWYPVAFSTGLKDDTMVPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGDEPPTATLPSLLPPSGFEVHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSGFLGLVAHSMDLNLLARSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTSQCATHLHQLHVCLPSSKQKTRLLYRMSLDFAPVLKHIPLMQHLWRYFAEQVLNEDLRLVLGQQERMNNGANVWNFPVSYDKLGVRYRLWRNALERGSN 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0304 544 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 217 317 IPR017941 GO:0051537
Aed10g0304 544 Coils Coil 119 146 - -
Aed10g0304 544 SUPERFAMILY ISP domain 211 322 IPR036922 GO:0051537
Aed10g0304 544 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 258 280 IPR015881 GO:0005506|GO:0051537
Aed10g0304 544 SUPERFAMILY Bet v1-like 313 540 - -
Aed10g0304 544 Gene3D - 339 544 - -
Aed10g0304 544 Pfam Rieske [2Fe-2S] domain 217 298 IPR017941 GO:0051537
Aed10g0304 544 Gene3D - 211 333 IPR036922 GO:0051537
Aed10g0304 544 Pfam Vanillate O-demethylase oxygenase C-terminal domain 351 540 IPR044043 GO:0016491
Aed10g0304 544 CDD Rieske_RO_Alpha_Cao 200 328 - -
Aed10g0304 544 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 72 543 - -
Aed10g0304 544 PANTHER CHLOROPHYLLIDE A OXYGENASE, CHLOROPLASTIC-LIKE 72 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0304 Aed-Chr10 2451542 2455023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0304 K13600 - gmx:100806298 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0304 10 2451542 2455023 Aed10g0304 10 2451542 2455023 ECH