Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0300 ATGGCTCAAACCATGTTACTCATGTCTAGTGTCTCTAGCAGCTATTCCGTGGATTTGAAGAAAGATCTTTTCCTCCAATTGCAGACTCAAACATTAAGGCCTAAGTTCTCTCAAACCTCATTCAACCCTCTTCCATCGTCAACTTCTTCTTTTTCTTCACCCCGTACATTCACAACTCTTGCCCTCTTCAAATCAAAGACCAAAGCCCCTCCTGCTAAGACTACTAAGGTTACAAAGCCAAAGCCAAAGGTTGAAGATGGTGTCTTTGGCACTTCTGGAGGGTTTGGTTTTACTAAGCAGAACGAGCTCTTTGTGGGTCGTGTTGCTATGCTTGGTTTTGCAGCATCACTGTTGGGTGAAGCAGTAACTGGGAAAGGAATTCTATCACAACTGAATCTGGAAACTGGAATTCCCATTTATGAAGCAGAGCCTCTGCTTCTGTTTTTCATCCTCTTCACCCTCCTAGGAGCCATTGGAGGTTTAGGTGACCGTGGAAAATTTGTTGATGACGACGAACCTACTACTGCAGGTGTTATTCCTCCAGGCAAAGGCCTTCGGGAAGCCCTTGGTCCTTTATTTGGATTCACGAAATCGAACGAGCTATTTGTTGGAAGATTGGCTCAATTGGGTTTCGTGTTCTCTTTGATTGGAGAAATTATAACAGGAAAGGGAGCTCTGGCCCAACTCAACATTGAGACAGGGGTACCAATCAACGAAATCGAACCACTAGTGTTGTTCAACGTTCTTTTCTTCTTCGTTGCTGCTTTGAATCCTGGGACTGGAAAATTCGTCACAGATGAAGAGGAGGATTAG 813 0.4428 MAQTMLLMSSVSSSYSVDLKKDLFLQLQTQTLRPKFSQTSFNPLPSSTSSFSSPRTFTTLALFKSKTKAPPAKTTKVTKPKPKVEDGVFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEAVTGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGGLGDRGKFVDDDEPTTAGVIPPGKGLREALGPLFGFTKSNELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFVAALNPGTGKFVTDEEED 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0300 270 Pfam Chlorophyll A-B binding protein 66 157 IPR022796 -
Aed10g0300 270 Gene3D Chlorophyll a/b binding protein domain 141 241 - -
Aed10g0300 270 Gene3D Chlorophyll a/b binding protein domain 57 140 - -
Aed10g0300 270 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 185 - -
Aed10g0300 270 SUPERFAMILY Chlorophyll a-b binding protein 79 249 - -
Aed10g0300 270 PANTHER PHOTOSYSTEM II SUBUNIT S 1 185 - -
Aed10g0300 270 PANTHER PHOTOSYSTEM II SUBUNIT S 193 256 - -
Aed10g0300 270 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 193 256 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0300 K03542 - gmx:100807355 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0300 10 2435699 2437560 Aed10g0300 10 2435699 2437560 ECH