Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0297 ATGATGAACGCCTACATTGTCGGCTTCGTGGTTCCGCTCCTCGTCCTCCTCTACCGCCATCGCAGCTCCAACAAGCGCCGTGGCCTCCCCGCCGAGGCCGGCGGCGAGCCAGGCCTCGCGCTCCGCAACCACCGCTTCAGCTCTCCGCTCAGCTCGGCGTGGCAGGGCGTCACCACGCTCGCGGAGCTCTTCGAGCGCGCATGCAGGCAGCACCAGGAGCGCCTGCTGCTCGGCACGCGCGAGCCGATCTCGCGTGAGATGGAGACCTCTTCGGACGGTAGAACCTTCGAGAAGCTTCATCTCGGAGATTACCAGTGGCTTACCTACGGGAAAGTGTTTGAATCCGTCTCGAGTTTCGCGTCCGGTTTGGCTTCGCTCGGGCATCGCAGGGAAGAGCGCGTCGCTATCTTCGCTGACACCAGAGAACGATGGTTTATTGCGCTGCAGGGTTGCTTCAGGAGGAATGTGACAGTTGTTACTATATATTCGTCGTTGGGAGAGGATGCTTTGTGTCACTCGTTGAATGAGACAGAGGTTACAACAGTGATTTGTGGGCGCAGAGAATTGAAATCACTAGTAAATATTAGTGGTCAACTTGACTCAGTGAAACGTGTGATATGCATGGACGACGATATCCCATCTGATGCCTCGTCTGCTCAGCATGGCTGGAAAATCACTTCCTTTTCTGACGTTGAGAGGCTTGGTAGAGAAAATCCTGTTGAGGCTGATTTACCCCTTTCAGCGGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGATTGCCTAAGGGTGTGATGATGACACATGGCAATGTCTTGGCAACAGTCTCTTCTGTAATGATAATAGTTCCTAACCTTGGGCCAAAGGATGTCTATCTAGCATACTTACCGATGGCTCATATCCTTGAATTAGTAGCTGAGAATTTGATTGCAGCTGTTGGAGGTTGTATAGGATATGGATCTCCTTTGACTTTAACAGATACATCAAACAAAATAAAAAAGGGAACACAGGGGGATGCCACCGCACTGATGCCAAGTGTGATGGCAGCTGTACCAGCAATTCTTGATCGTGTACGTGAGGGAGTGCTCAAGAAGGTAAATGCAAAGGGAGGATTGTCAAAGAAGTTGTTTCATTTTGCCTATGCACGAAGGTTACAAGCAATTAATGGTTGCTGGTTTGGTGCTTGGGGCTTGGAAAAAGCTCTGTGGAATTTTTCGTGTTCAAAAAGGTTCAAGCAATTTTGGGTGGTCGCATCCGGTTTATACTGTGTGGTGGTGCTCCCCTTTCTGGTGATACCCAAAGATTCATCAATATTTGTCTTGGGATATGGTCTCACAGAGACTTGTGCTGGTGGGTCATTCTCTGATTTTGACGATACATCTGTTGGCCGTGTTGGGCCACCTATTCCTTGCTCATATATTAAACTAATTGACTGGCCTGAAGGCGGATATTCAACCAATGACTCACCAATGCCACGTGGTGAAATTGTAATTGGTGGTCCAAATGTCACTCTTGGGTACTTCAAAAATGAAGGAAAAACAAACGAATCTTACAAGGTTGATGAAAAAGGAACGAGGTGGTTCTACACTGGTGACATAGGGAGATTTCATAAAGATGGTTGCATTGAGATCATTGATAGGAAAAAGGACATAGTTAAACTACAGCATGGAGAATATGTGTCATTGGGAAAGGTTGAGGCTGCTCTTTTTGCCAGTCCCTTCGTAGACAATATCATGTTGCATGCTGATCCTTTTCATAGCTACTGTGTGGCACTCGTGGTAGTTTCTCATTCCGCTTTGGAGCAATGGGCTTCAAAGCAAGGGATTGCTTATTCTGGTCTTTCAGAATTGTGCAGCAAAGAAGAAACTGTGAAGGAGGTGCATGCATCACTTGTAAAGGAAGGAAAGAAGGCTCGTTTGGAGAAATTTGAGATTCCTGCAAAAATTATGTTGCTTTCTGAACCATGGACTCCTGAATCTGGCCTAGTCACTGCAGCTCTTAAGCTCAAGAGAGAGATAATTAGGAAGACTTTTCAAGCAGAGCTCTTAGAGTTCTATGCCTCGTAG 2070 0.4734 MMNAYIVGFVVPLLVLLYRHRSSNKRRGLPAEAGGEPGLALRNHRFSSPLSSAWQGVTTLAELFERACRQHQERLLLGTREPISREMETSSDGRTFEKLHLGDYQWLTYGKVFESVSSFASGLASLGHRREERVAIFADTRERWFIALQGCFRRNVTVVTIYSSLGEDALCHSLNETEVTTVICGRRELKSLVNISGQLDSVKRVICMDDDIPSDASSAQHGWKITSFSDVERLGRENPVEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSSVMIIVPNLGPKDVYLAYLPMAHILELVAENLIAAVGGCIGYGSPLTLTDTSNKIKKGTQGDATALMPSVMAAVPAILDRVREGVLKKVNAKGGLSKKLFHFAYARRLQAINGCWFGAWGLEKALWNFSCSKRFKQFWVVASGLYCVVVLPFLVIPKDSSIFVLGYGLTETCAGGSFSDFDDTSVGRVGPPIPCSYIKLIDWPEGGYSTNDSPMPRGEIVIGGPNVTLGYFKNEGKTNESYKVDEKGTRWFYTGDIGRFHKDGCIEIIDRKKDIVKLQHGEYVSLGKVEAALFASPFVDNIMLHADPFHSYCVALVVVSHSALEQWASKQGIAYSGLSELCSKEETVKEVHASLVKEGKKARLEKFEIPAKIMLLSEPWTPESGLVTAALKLKREIIRKTFQAELLEFYAS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0297 689 Gene3D - 48 548 IPR042099 -
Aed10g0297 689 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 688 - -
Aed10g0297 689 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 11 688 - -
Aed10g0297 689 Pfam AMP-binding enzyme 99 556 IPR000873 -
Aed10g0297 689 SUPERFAMILY Acetyl-CoA synthetase-like 56 687 - -
Aed10g0297 689 ProSitePatterns Putative AMP-binding domain signature. 253 264 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0297 Aed-Chr10 2416971 2422526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0297 25 688 Acyl Lipid Metabolism Gene Families AT2G04350 59.172 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0297 K01897 - gmx:100778889 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0297 10 2416971 2422526 Aed10g0297 10 2416971 2422526 ECH