Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0284 ATGGCCTCTCGAACCCCTCTGTTCTTGCTCTTATGCTTCAGCTTCATCACTCTTATGCTCCTAATTCCCACTGAGGCTGTATGGTTAACCATCCCCAGCAAGGGAACTAAGTGTATGTCCGAGGAAATCCAGGCACACGTCGTCGTTTTAGCAGATTACTATGTTGTAGCCGATGATGTCAAGGGTCACCAACCTCAAACTATTTCCGCCAAGGTGACATCCCCTTATGGAAATAATCTTCACCATATTGAAAATGTTACTCACGGTCAGTTTGCATTTACAACAAGCGAGTCTGGGAACTACGTGGCATGCTTTTGGGTGGATGACAAACATCCAGAAGGTGCAGGAGAGACCACAATCAGCCTTGATTGGAAAACTGGAATCCGTGCCAAAGATTGGGACTCCGTTGCAAGAAAAGAAAAGATTGAGGGTGTTGAACTTGAGCTAAGGAAACTTGAAGGGGCTGTGGAAGCCATCCGGGACAATCTAATTTATTTGAAGAATAGGGAAGCAGAGATGAGGGAAGTTAGTGAAACAACGAATGCTAGAGTCGCTTGGTACAGTATCTTTTCCCTTAGTGTCTGCACTTTGGTTTCGGTGTTGCAGCTGTGGTATCTGAAACGATTCTTTCGGAAGAAGAAGCTCATATAG 651 0.4516 MASRTPLFLLLCFSFITLMLLIPTEAVWLTIPSKGTKCMSEEIQAHVVVLADYYVVADDVKGHQPQTISAKVTSPYGNNLHHIENVTHGQFAFTTSESGNYVACFWVDDKHPEGAGETTISLDWKTGIRAKDWDSVARKEKIEGVELELRKLEGAVEAIRDNLIYLKNREAEMREVSETTNARVAWYSIFSLSVCTLVSVLQLWYLKRFFRKKKLI 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0284 216 Pfam emp24/gp25L/p24 family/GOLD 28 211 IPR009038 -
Aed10g0284 216 Coils Coil 142 169 - -
Aed10g0284 216 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 5 216 IPR015720 -
Aed10g0284 216 SMART EMP24_GP25L_2 26 211 IPR009038 -
Aed10g0284 216 ProSiteProfiles GOLD domain profile. 36 151 IPR009038 -
Aed10g0284 216 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 5 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0284 Aed-Chr10 2297508 2304695 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0284 K20352 - gmx:100500676 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0284 10 2297508 2304695 Aed10g0284 10 2297508 2304695 ECH