Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0282 ATGAGTATAGTTTTTCCAAACGGGCTTTCGGGTTTGGAAGGTAGCACCACACCGGACTTGTTGCAATCGTTTCCTCCACACACTCCACCAGAGTCATTCGTTCGTTTCGTTTCGGCGCTCATAGTCATGGGTTTCTCAAAGGAACAGCTTCTTGCGCTGTTAAAGGAGCTTCAGATTCCATTTTCCCAGTATGAGCATCCAGTTGTTTTGACCGTTGACGCTCAGGCTCAATATGTTGGACATTTGGGGGGTGGGCTCAGTAAGAATTTATTTCTCAAGGACAAGAAAAGCAGGTTGTATGTTGTTTCTGCTTTAGCTGCTACCAAAGTAGACCTCAAAGTGTTATCTCAGCGGCTTGGTTTGGGAAAAGGTGGTCTCAGAATGGCACCTGAGGAGGCTTTAGGTGAAGTACTTCAGGTACCCTTGGGTTGTGTCACTCCATTTGCACTAGTGAATGAATCGGCACGAGATGTTTCACTGCTATTGGATCAAGGGTTCAAGTCTCAGAAACACTGCTTCTTCCATCCACTGTCAAATGACATGTCTATATCTCTAAATGCATGTGATCTTGACAAGTTTCTAAAATCAATTGGACGAAATCCCTCATACGTTGATTTGGAGGCCAACCCAACAGTGGGGAAAGATCAACCACCTGATTTAGCTGCACTAGTTCCATCTGGTTCAATAGTTTTACCCGATCAACCACAAAAACAATCTTCTTCACAGGTTCCTAAGGATGCAAACCATGTTTCTGTGGATAATGGAGCCAATACAGTTTCAGCCAAAGTTGTGAAGCCATCCTCTGGTGGGAAAAGTACAAAGGGGACGCCAGTAAAAAATGTTAATTCATCAGGCTCCTATGCAGATGTTGGGCAATTTGTTGAAGAGATATTGCAAAAAACATCACAATTATTGCTTTCAGAGGTCAAGGACAAAGAAAATGTAAAGTTAGACGGGGAGCAGCTGGGTACTGTGTTATCTGACAAATTACAGAAAAACCTCAACGCAGAGTTTAAGAACCTTGCTATGATATTCAAGAACACAGCATATACGGAAGGGTTCCATGCTGGTACTCATTATAGGCCACCGCTAATGTGA 1098 0.4335 MSIVFPNGLSGLEGSTTPDLLQSFPPHTPPESFVRFVSALIVMGFSKEQLLALLKELQIPFSQYEHPVVLTVDAQAQYVGHLGGGLSKNLFLKDKKSRLYVVSALAATKVDLKVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARDVSLLLDQGFKSQKHCFFHPLSNDMSISLNACDLDKFLKSIGRNPSYVDLEANPTVGKDQPPDLAALVPSGSIVLPDQPQKQSSSQVPKDANHVSVDNGANTVSAKVVKPSSGGKSTKGTPVKNVNSSGSYADVGQFVEEILQKTSQLLLSEVKDKENVKLDGEQLGTVLSDKLQKNLNAEFKNLAMIFKNTAYTEGFHAGTHYRPPLM 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0282 365 CDD PrdX_deacylase 47 204 - -
Aed10g0282 365 Pfam Aminoacyl-tRNA editing domain 66 193 IPR007214 GO:0002161
Aed10g0282 365 Gene3D - 43 213 IPR036754 GO:0002161
Aed10g0282 365 SUPERFAMILY YbaK/ProRS associated domain 45 206 IPR036754 GO:0002161
Aed10g0282 365 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 43 361 IPR040285 -
Aed10g0282 365 MobiDBLite consensus disorder prediction 231 282 - -
Aed10g0282 365 PANTHER PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED 43 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0282 Aed-Chr10 2282265 2286622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0282 - - gmx:100817904 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0282 10 2282265 2286622 Aed10g0282 10 2282265 2286622 ECH