Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0279 ATGGTAACTACTGTCCATATAAACTCACTCATGAGATTCACGCCATCCTCCAAGTTCTTTGGCTTTTCAAATCACTTCAACGCCGTTTTCGCACCCTCTTTCTCTCCCATCCCAAAGTTCTCATCTTCCATCGCCGTCACCATGTCCACTGTTTCCACTCAAAACGACACCGTCACCGTCACCCACAAAACGCAACAACCTTTGCAGATTGCAAAGCGCTTAGAGAAATTTCAGACAACAATCTTCACTCAAATGAGCTTGCTTGCCATCAAACATGGAGCCATAAACCTTGGTCAAGGCTTTCCCAACTTTGATGGTCCAGATTTTGTAAAGGAAGCAGCGATTCAGGCAATCAGGGATGGGAAAAATCAGTATGCGCGGGGTTATGGAGTTCCAGACCTTAACATTGCCATTGCTGAGAGATTTAAGAAAGATACTGGACTTGTGGTAGACCCTGAAAAGGAAATTACTGTTACATCTGGATGTACAGAAGCAATTGCTGCAACTATCTTAGGATTAATAAATCCTGGTGATGAGGTTATTATGTTTGCTCCTTTTTATGATTCTTATGAGGCCACTCTGTCCATGGCTGGTGCAAAAGTAAAAGGCATCACTTTGCGCCCTCCAGATTTTGCTGTCCCTATTGAGGAGTTGAAGTCCACCATCTCGAAAAATACCTGTGCCATTCTTTTAAACACTCCTCACAACCCTACTGGAAAGATGTTCACTCGTGAGGAGCTCAATTGCATTGCATCTCTTTGCATTGAGAATGATGTTCTGGTTTTCAGCGATGAAGTTTATGACAAGTTGGCTTTTGATATGGAGCACATTTCGATGGCTTCTTTGCCTGGAATGTTCAAAAGGACGGTGACATTGAACTCCTTGGGGAAGACATTCTCCTTAACAGGATGGAAGATCGGTTGGGCCATAGCACCCCCACACTTATCATGGGGAGTGCGACAGGCACATGCTTTCCTCACTTTCGCAACTGCACATCCTTTTCAGTGTGCTGCAGCAGCAGCTCTGAGAGCACCAGACTCTTACTATGCAGAGCTGAAGAGGGATTATATGGCAAAGAGAGCTATTTTGGTTGAAGGATTGAAGGCTGTTGGGTTCAAGGTATTCCCATCCAATGGAACCTACTTTGTGGTTGTTGATCACACCCCTTTTGGACTGGAAAATGATGTTGCATTTTGTGAATATCTAGTTAAGGAAGTGGGAGTGGTGGCAATCCCTACCAGTGTATTTTACTTGAATCCTGAAGAGGGAAAGAATCTAGTCAGGTTTACTTTCTGCAAGGATGAGGAAACTATTAGGTCTGCTGTTGAGAGGATGAAAGAGAAGCTTAGAAAATGA 1356 0.4388 MVTTVHINSLMRFTPSSKFFGFSNHFNAVFAPSFSPIPKFSSSIAVTMSTVSTQNDTVTVTHKTQQPLQIAKRLEKFQTTIFTQMSLLAIKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGYGVPDLNIAIAERFKKDTGLVVDPEKEITVTSGCTEAIAATILGLINPGDEVIMFAPFYDSYEATLSMAGAKVKGITLRPPDFAVPIEELKSTISKNTCAILLNTPHNPTGKMFTREELNCIASLCIENDVLVFSDEVYDKLAFDMEHISMASLPGMFKRTVTLNSLGKTFSLTGWKIGWAIAPPHLSWGVRQAHAFLTFATAHPFQCAAAAALRAPDSYYAELKRDYMAKRAILVEGLKAVGFKVFPSNGTYFVVVDHTPFGLENDVAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEETIRSAVERMKEKLRK 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0279 451 Gene3D Aspartate Aminotransferase, domain 1 84 445 IPR015422 GO:0003824
Aed10g0279 451 Pfam Aminotransferase class I and II 95 444 IPR004839 GO:0009058|GO:0030170
Aed10g0279 451 Gene3D - 107 345 IPR015421 GO:0003824
Aed10g0279 451 PANTHER FI04487P 71 451 - -
Aed10g0279 451 SUPERFAMILY PLP-dependent transferases 69 450 IPR015424 -
Aed10g0279 451 PANTHER FI04487P 71 451 - -
Aed10g0279 451 CDD AAT_like 95 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0279 Aed-Chr10 2264051 2266735 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0279 K23977 - gmx:100818968 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0279 10 2264051 2266735 Aed10g0279 10 2264051 2266735 ECH