Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0277 ATGTCTCAGAAAATCTGCACTTCATCAAATTACACCATGAAACACATCATAACTTTCTCTTGCACTTTCCTTTTGTTTACCACCACCTCATCTTACACCTTTTCAGAATACATCACTCCAAATTTCACTGCCACGTATCTTCACTTCATAGACAGCTTTGGCACGTTCCTGTTATCTCACAACAGAACATTCAAGGCTGCTATATTCAACCCCGGTGGCCAACAAACCAGTTTCTATCTGTGTGTTATCCATGCTTCATCCAACACTATAATTTGGTCTGCAAACCGTGATGCCCCCATCTCAGATTCTGGTAAAATGCTTCTATCTTTCAAAGGGATCACAATCCTCGACGAAGATGATAACACCAAATGGTCAACACCATCACTGAAATCATCACAAGTGATCAATAGGCTTGTGCTGACCGAGATGGGAAACCTCGTGTTACTTGACAAGTCCAATGTTTCTCTCTGGGAGAGTTTCCAAAACCCAACTGACACAATTGTTATTGGACAGAGTTTACCCATTGGAGCATCTTTGTCAAGTTCAGCATCCAATTCAGACTTCTCAGAAGGAAACTACAAGCTCACAATAACTTCCTCTGATGCAGCTCTGCAATGGTATGGCCAAACATACTGGAAACTTTCAACGGATACAAAAGTCTACAAGAATTCAAATGACATGGTTGAATACATGGCCATAAACAACTCAGGCTTTTATATCTTTGGAGATGGTGGAACAATTTTTCAACTTGGTTTGCCACCGGCTAGTTTTCGAATTGCCAAGTTAGGTACCTTGGGCCAGTTCACTATCAACAGCTTTTCTGGAACCAACTTGAAGCAAGAGTTTGTGGGGCCAGATGATGGTTGTCAAATTCCCTTGGCTTGTGGAAGAGCAGGTCTATGCACTCAGAACACTGTTTCCTCTTCACCTGTTTGTTCTTGTCCCCCAAACTTCCACGTAGGATCAGGTACTTTTGGTGGCTGTGTGCCAAGCAATGGATCCTATTCTTTGCCACTTGATTGTAAAAATTCTTCAGCTTTTTCATTTTTGAACATAGGGTACGTTGAGTACTTTGGAATTTTTTACTCTGATCCGGTTATGTACAAAGGGAATTTATCTGCCTGTCAGAATCTTTGTTCAAGTAACTGTTCCTGCTTGGGGTTTTTCTACAAAAGCACATCTGGTTCATGCTACATGATTGAGAATGAGTTGGGGTCAATTCAGTCAAGTAATGGAGGCGAAAGAGACACGATGTTGGGGTTCATTAAAGCTATTGTTGTTGCATCTAAAACTAGTAATGAACATGGTAGTGATGACGACAAGCAAAGTTCTCAAAACGGAGGGTTTCCTGTGGTGGTTGCGGTGCTGTTACCTATTATTGGATTCATTATTTTCATGGCCATAATTTTCCTTGTGTGGAGAAGATTGACACTCATGACACTCATGAGTTACCTTGAGTTGGCTGATCCAAGGTTAGAAGGGCGTGTTACATATGAAGAAGTGGAGAAAATGATTCGTATTGCCTTGTGTTGCGTTCATGAAGAACCAGCACTTAGGCCAAACATGGTCACTGTTGTTGGCATGTTGGAAGGTGGGACTCCATTGCCACATCCGAGGATAGAGTCTTTGAACTTTCTGCGCTTTTATGGCCGTAGGTATACTGAGGCTTCCACTATAGCGGAAGAAAATGAGTATGGTTCTGTGATGGATCAACAAGCACGTAATTCTACAAGCATGCCAAATGATTCACCGACTCATCGTGCTTTTTCTTACATGTCTTCACAAAATATCTCAGGGCCAAGATAG 1806 0.4181 MSQKICTSSNYTMKHIITFSCTFLLFTTTSSYTFSEYITPNFTATYLHFIDSFGTFLLSHNRTFKAAIFNPGGQQTSFYLCVIHASSNTIIWSANRDAPISDSGKMLLSFKGITILDEDDNTKWSTPSLKSSQVINRLVLTEMGNLVLLDKSNVSLWESFQNPTDTIVIGQSLPIGASLSSSASNSDFSEGNYKLTITSSDAALQWYGQTYWKLSTDTKVYKNSNDMVEYMAINNSGFYIFGDGGTIFQLGLPPASFRIAKLGTLGQFTINSFSGTNLKQEFVGPDDGCQIPLACGRAGLCTQNTVSSSPVCSCPPNFHVGSGTFGGCVPSNGSYSLPLDCKNSSAFSFLNIGYVEYFGIFYSDPVMYKGNLSACQNLCSSNCSCLGFFYKSTSGSCYMIENELGSIQSSNGGERDTMLGFIKAIVVASKTSNEHGSDDDKQSSQNGGFPVVVAVLLPIIGFIIFMAIIFLVWRRLTLMTLMSYLELADPRLEGRVTYEEVEKMIRIALCCVHEEPALRPNMVTVVGMLEGGTPLPHPRIESLNFLRFYGRRYTEASTIAEENEYGSVMDQQARNSTSMPNDSPTHRAFSYMSSQNISGPR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0277 601 Gene3D - 52 162 IPR036426 -
Aed10g0277 601 CDD PAN_AP_plant 338 419 - -
Aed10g0277 601 ProSiteProfiles Bulb-type lectin domain profile. 41 161 IPR001480 -
Aed10g0277 601 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 19 479 - -
Aed10g0277 601 MobiDBLite consensus disorder prediction 571 601 - -
Aed10g0277 601 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 483 601 - -
Aed10g0277 601 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 215 IPR036426 -
Aed10g0277 601 SMART blect_4 48 163 IPR001480 -
Aed10g0277 601 Gene3D Transferase(Phosphotransferase) domain 1 460 539 - -
Aed10g0277 601 ProSiteProfiles PAN/Apple domain profile. 341 417 IPR003609 -
Aed10g0277 601 Pfam D-mannose binding lectin 89 173 IPR001480 -
Aed10g0277 601 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 19 479 - -
Aed10g0277 601 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 483 601 - -
Aed10g0277 601 CDD B_lectin 54 163 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0277 Aed-Chr10 2242332 2244974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0277 485 579 Receptor kinase-like Gene Family AT1G53420 35.789 5.16e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0277 - - gmx:100305399 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0277 10 2242332 2244974 Aed10g0277 10 2242332 2244974 ECH