Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0272 ATGGCTTCTGAGAAGGTTGAGACTGTTGTTGCAGGGAATTACTTAGAAATGGAGAGGGAAGAGGAAGGTTCTAAGTCCACTACTGGCAAATTCTCTAGGCTCTTTTGGCATGGTGGCTCTGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCACAAGTGCTACTGACACTACCATATTCGTTTTCACAACTGGGGATGTTATCTGGGATCATATTTCAGCTTTTTTATGGATTGATGGGAAGCTGGACTGCTTACCTTATCAGTGTCCTTTATGTCGAGTACAGAACCAGAAAGGAGAGAGAAAAAGTTGATTTCAGAAACCATGTTATTCAGTGGTTTGAAGTGCTTGATGGACTTTTGGGGAAACACTGGAGGAATCTTGGTCTCTTTTTCAACTCTTCCCTTACCCATGGCCAGGTTGAGGGGGTGACGCACTCAGGGCCAGCCAAATTGGTTCTCTACTTCACTGGGGCTACCAACATTCTCTATACTTTTGGTGGACATGCTGTTACAGTGGAAGTGATGCATGCAATGTGGAAGCCACAGAAGTTTAAGATGATATATCTGATTGCAACCCTATATGTGCTGACCCTAACTTTGCCATCAGCATCTGCAGTGTATTGGGCATTTGGGGACCAGCTTCTCACACATTCAAATGCCCTCTCTTTGCTCCCAAGGAATGGCTTCAGAGATACCGCTGTCATTCTCATGCTCATTCATCAGTTCATAACATTTGGATTTGCTTGCACTCCTTTGTACTTCGTGTGGGAGAAATTCATTGGAGTGCATGAAACCAAGAGTTTGTTGAAAAGAGCGTTGGCAAGACTTCCTGTAGTGATTCCAATATGGTTTCTGGCAATCGTATTCCCTTTCTTTGGTCCCATTAACTCAACTGTTGGATCTCTCCTTGTCAGCTTCACTGTTTACATTATTCCTGCTATGGCACACATGGTCACCTTTGCTTCAGCACCCGCTAGAGAGAATGCTGTGGAGAGACCACCATCAAAGTTAGGAGGTTGGGTAGGATTGTACTCGATGAACGTGTTTGTGGTGGTATGGGTTTTGGTGGTAGGATTTGGGTTGGGAGGATGGGCAAGCATGATTAATTTCATACACCAAATTGACACATTTGGGCTATTTGCAAAGTGCTATCAGTGTCCCCCTCACAAGCCTTAA 1185 0.4439 MASEKVETVVAGNYLEMEREEEGSKSTTGKFSRLFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQLFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNLGLFFNSSLTHGQVEGVTHSGPAKLVLYFTGATNILYTFGGHAVTVEVMHAMWKPQKFKMIYLIATLYVLTLTLPSASAVYWAFGDQLLTHSNALSLLPRNGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHETKSLLKRALARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPAMAHMVTFASAPARENAVERPPSKLGGWVGLYSMNVFVVVWVLVVGFGLGGWASMINFIHQIDTFGLFAKCYQCPPHKP 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0272 394 PANTHER OS05G0424000 PROTEIN-RELATED 3 135 - -
Aed10g0272 394 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 3 136 389 - -
Aed10g0272 394 PANTHER OS05G0424000 PROTEIN-RELATED 136 389 - -
Aed10g0272 394 Pfam Transmembrane amino acid transporter protein 37 129 IPR013057 -
Aed10g0272 394 Pfam Transmembrane amino acid transporter protein 133 359 IPR013057 -
Aed10g0272 394 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 3 3 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0272 Aed-Chr10 2216891 2219848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0272 136 389 Organic Solute Cotransporters AT2G21050 81.496 2.93e-153 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0272 K13946 - gmx:100816267 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0272 10 2216891 2219848 Aed10g0272 10 2216891 2219848 ECH