Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0266 ATGCTGTTGCGTAAACCTGCGTTGACAGCGTCGCTGCTATCAGCCACCACAAAGAAGCTCTACAGCCACCGTTATTCTACACCTGCATTCATGGCGTCTTCAGGTGTGGCGTGCAGTTTGCTGGTTTTGTGTGGCAAAGCACTGGCAGAGAATGAAGCTGCTAAAGCTATAAAGAGCAGTAACACACTGAAGCTCCCAGAGGATGAAAAAGTTTCACTTGTTTTGCATTCGGAGATGGATAAATCAGTTATGCAAGGGTTTTTCCAAGTTCATTCTTATATGAATTCTCTTTCCACCAGTCAATTTGGCAGGCTTCTCATTTGGTCTCCAGACTTAACTTCAACACACGATGTCGTTTCGCAAAACTTTTGTGAGCTTCCCATTGGTACAGTTTGCATTGCTGATGTTCAGACCAAGGGTCGAGGTCGGTCGAAGAATGTCTGGGAGTCTCCGTTAGGTTGCCTCATGTTCTCTTTTACTATGCAAATGGAGGATGGACGAGTCGTTCCTTTGGTTCAGTATGTGGTTTCCCTGGCTTTGACAGAGGCAATCAAGGATATATGTGACAAAAAGGGGTTACCCAGCATAGATGTTAGAATCAAGTGGCCAAATGATCTTTACTTAAATGGCTCTAAAGTTGGAGGCATTCTTTGTACCTCGACATATAAATCAAAGAATTTCAATGTTAGTGCAGGAATAGGCTTGAATGTCAATAATAAGATGCCAACAACATCCTTAAATGCAATTCTAAAAGGGTTCTATACAGGAGCTTACCAATTTCAAAGAGAAGATGTTCTAGCAGCCTTTTTTAACAAATTTGAGAAATTTTATGATTTATTTGTGAATCAAGGATTTCAAACCCTAGAGGAGCTATATATCAAGACATGGTTGCACAGTGGACAGAGAGTTGTTGTACAGGAAAAGAATGAGGACAAAGTGATCGAACATGTGGTAACTATTCAGGGTTTGACAACCTCGGGATATTTGTTGGCTGTCGGTGATGACAATCAAATGTGTGAGCTCCACCCTGATGGTAATAGCTTTGACTTTTTCAAAGGACTGGTCAGAAGGAAACTCGAGTGA 1083 0.4174 MLLRKPALTASLLSATTKKLYSHRYSTPAFMASSGVACSLLVLCGKALAENEAAKAIKSSNTLKLPEDEKVSLVLHSEMDKSVMQGFFQVHSYMNSLSTSQFGRLLIWSPDLTSTHDVVSQNFCELPIGTVCIADVQTKGRGRSKNVWESPLGCLMFSFTMQMEDGRVVPLVQYVVSLALTEAIKDICDKKGLPSIDVRIKWPNDLYLNGSKVGGILCTSTYKSKNFNVSAGIGLNVNNKMPTTSLNAILKGFYTGAYQFQREDVLAAFFNKFEKFYDLFVNQGFQTLEELYIKTWLHSGQRVVVQEKNEDKVIEHVVTIQGLTTSGYLLAVGDDNQMCELHPDGNSFDFFKGLVRRKLE 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0266 360 SUPERFAMILY Class II aaRS and biotin synthetases 93 296 IPR045864 -
Aed10g0266 360 Pfam Biotin/lipoate A/B protein ligase family 113 236 IPR004143 GO:0036211
Aed10g0266 360 PANTHER HOLOCARBOXYLASE SYNTHETASE (BIOTIN-(PROPRIONYL-COA-CARBOXYLASE (ATP-HYDROLYSING)) LIGASE) 53 358 - -
Aed10g0266 360 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 91 281 IPR004143 GO:0036211
Aed10g0266 360 PANTHER BIOTIN PROTEIN LIGASE 53 358 - -
Aed10g0266 360 Gene3D Bira Bifunctional Protein; Domain 2 94 295 IPR045864 -
Aed10g0266 360 TIGRFAM birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 110 333 IPR004408 GO:0004077|GO:0036211
Aed10g0266 360 CDD BPL 106 280 IPR004408 GO:0004077|GO:0036211
Aed10g0266 360 Pfam Biotin protein ligase C terminal domain 298 353 IPR003142 GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0266 K01942 - gmx:100818402 681.404