Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0265 ATGCATCCTTTCTGCTGCGTGTCCGCCATTTCCGACCAGGCCTCGCCCGTGAAACCCTCGTTCGCAGACTTCGCCATGCCGCCTCTCCCCGCTGCTGCCTCCGCCACCGCTGCCGCCGTGAGATCCGATTCGGCTCCCCGGCATAGCCACAAGCATAGCCACAGCCACAGCGGGAGCCAGCGGGAGCAGCCGGTGGACGTGAAGATCAACGACCTGGTCGGGAACGGAATCTCCGGAATACTGTACAAGTGGGTGAATTACGGGAAAGGATGGCGACCGCGATGGTTCGTACTCCAAGACGGCGTTCTTTCCTACTATAAGATTCACGGACCTGATAAGATCGTCGTGAATCCCGAAACCGAGAAAGGCTCCATGGTCATTGGCGAAGAATCCATGCGTAGGATCACTCGCAACCGCAATTCCTATCCCTGCCAGCACGTATCGACGATTCGCGAGAGCAAATCGGACGACAAGAGGTTTTCGATATTCACGGGAACGAAGAGGCTCCACCTGAGGGCGGAGACGCGGGAGGATCGCGTTGCGTGGATGGAGGCGTTGCAGGCGGTGAAGGACATGTTCCCGCGGATGTCGAACAGCGAGTTGATGGCTCCGGTGGACAATGTAACCGTTTCGACGGAGAAATTGAGAGTTCGGTTGATGGAAGAGGGAGTGAGCGAGGCGGCTATTCAGGAGAGTGAGCAAATCATGAGGACCGAGTTTGCGGCGCTGCAAAGCCAGCTTGTGCTGCTTAAGCAGAAGCACTCCGCCCTCATTGACACCTTGCGTCAATTAGAGACAGAAAAGGTTGATCTGGAGAATACAGTAGTTGATGAGAGTCAAAGACAGTGGAATGATGAAGAAGCTTCCTCGAGATTAGCGCAAGAAAAATTTAGTGAAGGAACTGCAAGCGAATCTGAAGATGACAATGAGAGAAATGATGCTGCAGAGGAAGAAACAGATGATGATGACAATGCCTTTTTTGACACTCGTGATATTCTATCATCTAGTTCTTTTAAAAGTAATGGGTCTGATTATCGAGTATCATCCTTCTCTTCAGATGATGACGGGTTCTATGCATTTGAATCAGAGGATGACATAGATCCTTCAATTAGATACGTTGGAACCAATTACCCTCATGTTAAGCGGCGTAAGAAATTGCCAGACCCTGTAGAAAAAGAGAAAGGCGTCAGTCTTTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACGAAAGTTTGCCTTCCTGTTTATTTTAACGAGCCTCTTTCCTCCCTGCAAAAATGTTTTGAAGAAATGGAGTATTCATATCTTCTGGACCAAGCATATGAATGGGGAAAAAGGGGTAATAGCCTCATGAGGATTCTCTACGTCGCGGCTTTTGCTATATCTGGCTATGCTTCAACTGAAGGAAGAGTTTGCAAACCATTTAATCCATTACTTGGGGAAACATTTGAGGCTCACTATCCTGATAAAGGCCTTCGTTTTTTCTCAGAGAAGGTCAGTCATCACCCTATGATTGTCGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGTGATAGCAACCTAAAGAGCAAATTTTGGGGGCGATCAATTCAACTTGACCCTGTCGGTGTTTTGACTTTGGAATTTGATGACGGGGAAGTTTTCCAGTGGAGCAAGGTTACTACATCAATATACAATCTCATACTGGGAAAGCTGTATTGTGATCACTACGGTACAATGCGTATACAGGGAAACCAAGAGTACTCGTGTAAACTAAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCACCAGGTTCATGGTACAATTCAAGATAGGAATGGAAAAACTGTATCAACTTTGTTTGGAAAATGGGATGAAAGCATGCATTATGTTAATGGAGACTACACTGGGAAAGGGAAAGGTCACGAATCTCTGTCCGATGCCCGTTTGCTCTGGAAGCGAAGCAAGGCTCCCCAGTTTCCCACTAGATATAACTTCACTCGCTTTGCCATCACATTAAATGAACTTACGCCTGGATTGAAGGAGAAGTTGCCACCTACAGATTCAAGGTTAAGACCAGACCAAAGGTATTTGGAAAATGGAGAGTATGACATGGCAAATGTAGAGAAGTTACGGCTAGAGCAGCGGCAGCGCCAGGCTCGGAAGATGCAAGAGAGTGGTTGGAAACCACGGTGGTTTGCAAAGGATAAAGAGAGCGGGTCATACCGCTATGTAGGAGGGTATTGGGAGGCCAGACAACGAGGAAACTGGGACACCTGCCCTGACATCTTTGGCCAAATTCCTTCGGATCATATTTCTGACGAAGCTCAAACTACTACATTTTAG 2343 0.4733 MHPFCCVSAISDQASPVKPSFADFAMPPLPAAASATAAAVRSDSAPRHSHKHSHSHSGSQREQPVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPETEKGSMVIGEESMRRITRNRNSYPCQHVSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPVDNVTVSTEKLRVRLMEEGVSEAAIQESEQIMRTEFAALQSQLVLLKQKHSALIDTLRQLETEKVDLENTVVDESQRQWNDEEASSRLAQEKFSEGTASESEDDNERNDAAEEETDDDDNAFFDTRDILSSSSFKSNGSDYRVSSFSSDDDGFYAFESEDDIDPSIRYVGTNYPHVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDQAYEWGKRGNSLMRILYVAAFAISGYASTEGRVCKPFNPLLGETFEAHYPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQEYSCKLKFKEQSIIDRNPHQVHGTIQDRNGKTVSTLFGKWDESMHYVNGDYTGKGKGHESLSDARLLWKRSKAPQFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYDMANVEKLRLEQRQRQARKMQESGWKPRWFAKDKESGSYRYVGGYWEARQRGNWDTCPDIFGQIPSDHISDEAQTTTF 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0265 780 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 2 770 - -
Aed10g0265 780 MobiDBLite consensus disorder prediction 35 65 - -
Aed10g0265 780 MobiDBLite consensus disorder prediction 309 325 - -
Aed10g0265 780 Gene3D - 483 661 - -
Aed10g0265 780 Pfam Oxysterol-binding protein 397 751 IPR000648 GO:0008289
Aed10g0265 780 ProSiteProfiles PH domain profile. 74 191 IPR001849 -
Aed10g0265 780 SUPERFAMILY Oxysterol-binding protein-like 392 774 IPR037239 -
Aed10g0265 780 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 770 IPR000648 GO:0008289
Aed10g0265 780 CDD PH_ORP_plant 77 198 - -
Aed10g0265 780 MobiDBLite consensus disorder prediction 280 326 - -
Aed10g0265 780 SMART PH_update 75 193 IPR001849 -
Aed10g0265 780 Gene3D - 76 200 IPR011993 -
Aed10g0265 780 Gene3D - 694 758 - -
Aed10g0265 780 Coils Coil 247 281 - -
Aed10g0265 780 Pfam Pleckstrin homology domain 82 187 - -
Aed10g0265 780 SUPERFAMILY PH domain-like 77 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0265 Aed-Chr10 2156831 2162213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0265 K20456 - gmx:100137077 1463.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0265 10 2156831 2162213 Aed10g0265 10 2156831 2162213 ECH