LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed10g0261	ATGTCCTTAATGGCAGCTTCTTCCGCTAACAAGCATTTGCACATTGGCCTCCAACATGGTGTCGTTGGAGGCTTTGATATTCCTAGTCCCAAGAAGAAGTTACCCGAACCAGCATCATTCTCAAGCGAAGTCGCGTTGAAGGCGAAGGTGGACTGGAGCATCGAAGTCACAGGCTTGGTTGCCCACCCCACCCGTTTCACCATTCAGCAACTGCTCCAAGACTTCCCCAGCCGCGAGTTCCCTGCCACACTTGCCACCCGCGCTGGGGAACAACAAACTGCCGCCATCTCCACTTCGGTCTGGCGAGGCGTACCATTGTGGAAAGTGCTCAAGCGCTGCGGGGTCTTTAGTCGCGCCAAGGGGGCACTCCATGTCTGCTTTGAAGGCTCCGATAAGGACAGTATCATGCGAGAGATTGCACTTGATCCCTCCCGTGACATCATCATCGCCTACATGAAAAACGGGGAACCTTTGTCCCCTCATCAGGGTTTCCCTGTTAGGATCATAATACCAGGTTTCATCGGACCTTGCATCGGGAAATCGTTCAACCGCATCATTGTCGCTACTCAACACTCTGACGTTCATTCCGAACTTGCCAATACACAAGACTGGTGGTACAAGCCAGAGTATACTATCAACGAGCTTAACGTAAACTCTGTGATAACTACGCCAAGTCACGATGAGATCCTGCCAATCAACTCGTTGACTATTGAGATGCCTTATGTTCTCAGAGGCTACGCATACGCTGGTGGTGGGAGAAAGGTAACACGTGTTGAGGTAACACTGGATGGTGGTGAAACGTGGCAAGTGTGCATGCTGGACTGTCAGGAGAAACCCAACAAATATGGGAAGTACTGGTGTAGGTGTCTCTGGTCGTTGGAAGTAGAGGTGTCGGACCTGCTCGGAGCCACGGAGATTGCGGTTCGCGCTTGGGACGAGGCACTCAATACCCAGCCTGAGAACCTTAATTCGAATGTTATGGGCATGATGAACAACTGCTGGTTCAGGGTGAAAACGAACGTAGGCCAGTCCCACAAGGGTGATCATGAGATTGGTATTGTGTTCGACCACCCCGTCCAACTAGGCAACCATTCTGGCGGCTGGATTCCCAAACAAAAACATCTGCAGAAATCATCAAACTCCAACCCAACCCATGATTCAGTTCGCAGTGCAGCCAAATTTGGAAAACTTGGGCTACGACATCCACAACAACTTGCTGGTGTTTTAGGAGACTAG	1236	0.5097	MSLMAASSANKHLHIGLQHGVVGGFDIPSPKKKLPEPASFSSEVALKAKVDWSIEVTGLVAHPTRFTIQQLLQDFPSREFPATLATRAGEQQTAAISTSVWRGVPLWKVLKRCGVFSRAKGALHVCFEGSDKDSIMREIALDPSRDIIIAYMKNGEPLSPHQGFPVRIIIPGFIGPCIGKSFNRIIVATQHSDVHSELANTQDWWYKPEYTINELNVNSVITTPSHDEILPINSLTIEMPYVLRGYAYAGGGRKVTRVEVTLDGGETWQVCMLDCQEKPNKYGKYWCRCLWSLEVEVSDLLGATEIAVRAWDEALNTQPENLNSNVMGMMNNCWFRVKTNVGQSHKGDHEIGIVFDHPVQLGNHSGGWIPKQKHLQKSSNSNPTHDSVRSAAKFGKLGLRHPQQLAGVLGD	411

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed10g0261	411	Pfam	Oxidoreductase molybdopterin binding domain	48	193	IPR000572	-
	Aed10g0261	411	PANTHER	NITRATE REDUCTASE [NADH] 2	50	386	-	-
	Aed10g0261	411	MobiDBLite	consensus disorder prediction	372	388	-	-
	Aed10g0261	411	Gene3D	-	214	393	-	-
	Aed10g0261	411	MobiDBLite	consensus disorder prediction	366	388	-	-
	Aed10g0261	411	PRINTS	Eukaryotic molybdopterin domain signature	94	109	IPR008335	GO:0016491
	Aed10g0261	411	PRINTS	Eukaryotic molybdopterin domain signature	159	172	IPR008335	GO:0016491
	Aed10g0261	411	PRINTS	Eukaryotic molybdopterin domain signature	142	158	IPR008335	GO:0016491
	Aed10g0261	411	PRINTS	Eukaryotic molybdopterin domain signature	322	335	IPR008335	GO:0016491
	Aed10g0261	411	PRINTS	Eukaryotic molybdopterin domain signature	284	294	IPR008335	GO:0016491
	Aed10g0261	411	PRINTS	Eukaryotic molybdopterin domain signature	243	257	IPR008335	GO:0016491
	Aed10g0261	411	PRINTS	Eukaryotic molybdopterin domain signature	257	269	IPR008335	GO:0016491
	Aed10g0261	411	PRINTS	Eukaryotic molybdopterin domain signature	309	321	IPR008335	GO:0016491
	Aed10g0261	411	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	50	386	IPR001834	GO:0016491
	Aed10g0261	411	Gene3D	-	33	213	IPR036374	-
	Aed10g0261	411	SUPERFAMILY	Oxidoreductase molybdopterin-binding domain	51	250	IPR036374	-
	Aed10g0261	411	Pfam	Mo-co oxidoreductase dimerisation domain	210	340	IPR005066	GO:0016491\|GO:0030151
	Aed10g0261	411	SUPERFAMILY	E set domains	214	341	IPR014756	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed10g0261	Aed-Chr10	2102286	2106255	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed10g0261	K10534		-	gmx:732634	494.582

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed10g0261	10	2102286	2106255	Aed10g0261	10	2102286	2106255	ECH