Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0246 ATGGCGGAAAGTTCCGAATGCATTGACGTGAAGCTCTCTCCTGCACCGGATCGAAGGATTCCGTTGATGAGATCAAGAAGTGGCGACACGTGGGTGGTGTCGGTGTTTGTAATAATCGAAATCGGAGTTTTCATAGCCACCATGCTCGTGAACGATTGCTGGACCAATTCTCACGGTGATTGCGCTCTCGGAGCTCTCGGAAGGTTCTCGTTCCAGCCTCTCGCAGAGAATCCTCTCTTAGGTCCTTCTCAGTCCAAGTTGGATGAAATGGGAGCTCTTCGACGGAGCCTTTTGACAGAGCATCACCAAACATGGCGTCTTTTCACATCTCCATTTTTGCATGCTGGAGTCTTCCACCTGCTCCTCAATCTCTCCAGTGTCATCTACGTCGGAGTTAGCCTCGAGCACCACTTTGGACCCATAAGGATTGGTATAATCTATGCATTGTCTGCTTTTGTGGGTTCCTTGGTGTCTTCTCTTTTTCTCCAAAACATCCCCGCTGTTGGTGCTTCCGGTGCTTTATATGGATTACTGGGAACATTGCTTTCGGAACTTGTTTGGAACTGGAAATTTCATTCCAATAAGATTTCAGCAATAGCATCATTAGTCTTTGTCTTTGTGTGCAACTTTGTCCTTGGTTTTCTGCCTTATGTAGACAATTTTGCAAGCATTGGAGGTTTCATATCAGGGTTCCTTCTTGGATCTGTTTTTTTGCTCAGCCCTCAGCTCCAACCAGTAGCTCCAAATAAAGGAGGTTTGATTGATTATGGTGTCAAAAGTTACATCAAGTTAAAGTTGAATCAAAAGCTGGACAGACCAGTTCTCAGGATTGTTTCTCTTATCTTCTTGAACCTTTTATTGGCTGGTTGTCTTGTGGCAGTTCTTCATGGAATCAACATCAACAGTTATTGCACATGGTGTCCATATGTCGATTGTATCCCTTTTACAAGCTGGCACTGCAAAGACACAGAAACCTCTTGTGAGACAATGGTGAGCAATGCTCAGCTGACAATGACCTGTATTGAGAATGGCAATTTCCGAGTATTTCCTTTTACCAACATCTCTCGGGCAAGGTTTAATGATTTGTGCAATCTGATATGCTGA 1104 0.4438 MAESSECIDVKLSPAPDRRIPLMRSRSGDTWVVSVFVIIEIGVFIATMLVNDCWTNSHGDCALGALGRFSFQPLAENPLLGPSQSKLDEMGALRRSLLTEHHQTWRLFTSPFLHAGVFHLLLNLSSVIYVGVSLEHHFGPIRIGIIYALSAFVGSLVSSLFLQNIPAVGASGALYGLLGTLLSELVWNWKFHSNKISAIASLVFVFVCNFVLGFLPYVDNFASIGGFISGFLLGSVFLLSPQLQPVAPNKGGLIDYGVKSYIKLKLNQKLDRPVLRIVSLIFLNLLLAGCLVAVLHGININSYCTWCPYVDCIPFTSWHCKDTETSCETMVSNAQLTMTCIENGNFRVFPFTNISRARFNDLCNLIC 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0246 367 PANTHER RHOMBOID-RELATED 15 367 IPR002610 GO:0004252|GO:0006508|GO:0016021
Aed10g0246 367 PANTHER RHOMBOID-LIKE PROTEIN 8 15 367 - -
Aed10g0246 367 SUPERFAMILY Rhomboid-like 30 242 IPR035952 -
Aed10g0246 367 Pfam Rhomboid family 100 240 IPR022764 GO:0004252|GO:0016021
Aed10g0246 367 Gene3D - 25 240 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0246 Aed-Chr10 1992372 1994971 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0246 - - gmx:100775875 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0246 10 1992372 1994971 Aed10g0246 10 1992372 1994971 ECH