Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0228 ATGGTTTTGGGGCTGAAAGAGATTCAGATTCGGGGAGAAATTCGTACCAATGTTGATTACACCATTGATCTTCTGAATGTTTCAGACTACAGAGAAAACAAAATTCACACAGGTTGGCTGGACAGTAGAATTGCAATGCGGGTTAGGGCAGAGAGGCCTCCCTGGTATCTTTCTGTTGTTGGAGGGGCACTCTATCACATATCTCTTGTCCATTCTCAAGTGTCCTTGAACATTGAAGGAAGCAAATATACAATTGACATGATACGAGGTGGGTCTGGAAGTTATAAATTGAGAATGAATCAATCAGAGATAGAAGCAGAAATACATACTTTACGTGATGGAGGTTTGCTAATGCAGGCAAGTATTTGTTCTCTAAACTACCTATACTCCGATCAGACCATATCTGGAAAGGGATTTAGTAAAGCATCAGATAATTCTTTAGTATGGAATATATTGTTGGATGGAAACAGTCATGTAATATATGCAGAGGAAGAAGCAGCTGGAACTCGCCTTCTAATAGATGGAAGGACTTGCTTGCTTCAGAATGATCATGATCCATCGAAGTTGGTTGCAGAGACACCATGCAAGCTTCTGAGATATTTGGTTGCAGATGACAGTCATGTTGATGCTGACACACCGTATGCTGAAGTTGAGGTCATGAAAATGTGCATGCCTCTTCTTTCGCCTGCTTCTGGAATTATTCATTTCAAAATGTCTGAAGGTCAAGCAATGCAGTCTGGTGAACTTATAGCAAGGCTTGATTTGGATGATCCTTCAGCTGTAAGAAAGGCAGAACCCTTCACTGGGAGCTTCCCAGTCCTGGGACCTCCTACTGCAATTTCTGGTAAAGTTCATCAGAAATGCGCTGCAAGCCTAAATGCTGCACGGATGATTCTTGCTGGGTATGAGCACAATATCGATGAAGTTGTGCAAAATTTGCTAAATTGCCTTGATAGTCCTGAATTGCCTTTCCTTCAATGGCAAGAGTGCTTGGCAGTTCTAGCAACCCGTCTTCCCAAAGATCTAAAAAATGAGTTGGAATCAAAATATAAGGAGTTTGAGGGGATTTCAAGCTCCCAAATTGCTGATTTCCCTGCCAAATTATTGAAGGGAATTATTGAAGCTCATCTTTCCTCCTGTCCTGACAAAGAAAAAGGAGCTCAAGAAAGGCTAGTTGAACCTCTATTAAGTCTTGTTAAGTCTTATGAGGGTGGAAGAGAAAGCCATGCCCATATAATTGTTCAATCCCTTTTTGAAGAGTATCTTTCTGTTGAAGAATTATTTAGCGATAATATTCAGGCTGATGTGATTGAACGTCTGCGTCTACAATACAAGAAAGATCTATTGAAGATTGTCGATATAGTGCTCTCTCATCAGGGAATCAAGAGTAAAAATAAGCTGATATTGCGACTAATGGATAAATTGGTTTACCCTAACCCTGCTGCCTATAGGGATCAGTTAATCCGTTTCTCTTTACTCAACCATACAAATTATTCTGAGTTGGCTCTAAAGGCAAGTCAACTGATGGAACAAACTAAATTAAGTGAACTTCGATCCAACATTGCTAGAAGTCTTTCTGAATTAGAGATGTTCACAGAGGATGGTGAAAGTATTGATACTCCCAAGAGGAAGAGTGCCATTAATGACCGAATGGAGGATCTTGTGAGCGCCCCTTTGGCGGTTGAAGATGCCCTCGTTGGTTTATTTGATCACAGTGATCACACCCTTCAGAGGAGGGTTTTGGAAACTTATATACGCAGGCTCTACCAGCCATATCTTGTCAAAGGGAGTGTCAGGATGCAATGGCACCGATCTGGTCTTATTGCTACATGGGAGTTCTATGATGAGTACATTGAAAGGAAGAATGGGGTTGAAGACCAAACATTGAATAAAACGGTGGAGGAGAAACATGGTGAGAAAAAGTGGGGAGTGATGGTTATAATTAAATCTCTTCAATTTTTGTCTGCAATTATCAGTGCTGCATTGAGGGAGGCAACCAACAATCTTCATGAAGCACTTACAAGTGGTTCTGTGGAACCAGTTAACTATGGTAATATGATGCACATTGGATTAGTGGGCATCAACAATCAGATGAGTTTACTGCAAGACAGTGGTGATGAGGATCAGGCTCAAGAAAGAATCAATAAATTAGCTAAAATACTCAAAGAGCAGGAAGTAGGCTCCACCATACGAGCTGCAGGTGTCAGAGTAATCAGCTGTATCATACAAAGAGATGAAGGACGTGCCCCAATGAGGCACTCCTTTCACTGGTCAGAAGAAAAGCTTTACTATGCGGAGGAACCTTTGTTACGTCATCTGGAACCTCCACTATCCATTTATCTTGAATTGGACAAACTTAAAGCCTATGAGAATATACGGTATACTCCATCTCGAGATCGTCAATGGCACCTCTACACGGTTGTTGATCACAAGCCACAACCAATTCAAAGAATGTTTCTTCGAACACTTCTGAGACAGCCAACAACAAATGAAGGGTTCTCTTCATATCAAAGGCTGGATGCAGAAACATCTCGTACCCAATTGGCCATGTCCTTTACTTCAAGGAGCATTTTTAGGTCCTTGTTGGCTGCAATGGAGGAGTTGGAACTTAATGCACACAATGCCAATATCAAATCTGAACATGCTCATATGTACCTCTATATCATACGCGAGCAACAAATAGATGATCTTGTTCCCTATCCCAAGAGAATTAACATAGATGCTGGGAAAGAAGAAACAACAGTTGAGGCAGTCTTGGAAGAACTGGCACGGGAAATCCATTCAGCTGTTGGTGTAAGAATGCATAGATTAGGGGTTGTTGTGTGGGAAGTCAAGCTCTGGATGGCAGCCTGTGGACAGGCAAATGGTGCTTGGAGGGTCATTGTAAACAATGTGACTGGTCATACATGCACTGTACATATATACCGAGAAAAGGAGGATACTGTCACTCATAAAGTGGTATACAGTTCAGTTTTGGTCGAGGGTCCACTGCATGGTGTGCCAGTGAATGAAAATTATCAGCCTTTGGGAGTTATTGACCGAAAGCGACTTTCAGCAAGAAAGAACAGCACCACATACTGCTACGATTTTCCTCTTGCATTTGAAACAGCCTTGGAACAGTCATGGGCAATCCAACAGCCAGGATTTCAAAGACCCAAAGATAAAAATCTCTTAAAGGTAACAGAGCTTAAACTTGCGGATAAAGAAGGTAGCTGGGGTACTCCTCTTGTTCCTGTGGAGCGTTACCCTGGACTCAATGATGTTGGCATGGTAGCCTGGTTTATGGAAATGTGTACCCCTGAGTTCCCATCTGGAAGGACAATATTGGTTGTTTCAAATGATGTGACCTTCAAGGCTGGTTCTTTTGGCCCGAGAGAGGATGCATTCTTCCGTGCAGTAACTGATCTTGCATGTACAAAAAAGCTACCTTTAATTTATTTGGCCGCAAATTCTGGTGCTCGTTTAGGTGTAGCTGAAGAAGTCAAATCCTGTTTCAGAGTTGGTTGGTCTGAGGAATCTAATCCTGAGCATGGCTTTCAGTATGTATATTTAACACCTGAGGATTATGCTCGGATTGAATCATCAGTGATAGCACATGAATTAAAGCTTGAGAGTGGAGAAACCAGATGGGTTATAGATACCATTGTTGGCAAGGAGGATGGCCTTGGGGTTGAAAACTTGAGTGGAAGTGGGGCTATTGCTGGTGCTTATTCAAGGGCATACAAGGAAACTTTTACACTGACATATGTGACTGGCAGAACTGTTGGAATTGGTGCTTATCTTGCTAGGCTTGGGATGAGATGCATACAAAGGCTTGATCAGCCCATAATTCTTACTGGTTTTTCAGCATTAAACAAACTTCTTGGTCGGGAGGTATACAGCTCTCACATGCAACTTGGTGGACCTAAAATCATGGCAACTAATGGAGTCGTTCATCTTACAGTTTCCGATGATCTTGAAGGTGTTTCTTCTATTTTGAAGTGGCTTAGCTACGTTCCTTCTCATGTAGGTGGTGCACTTCCCATTGTAAAGCCACTTGATCCTCCAGAAAGACTAGTGGAGTATTCCCCAGAAAACTCGTGTGATCCTCGTGCTGCCATTTCTGGAACCTTGGATGGTAATGGAAGATGGCTGGGAGGCATTTTTGACAAAGACAGCTTTGTGGAGACACTAGAGGGATGGGCAAGAACAGTTGTTACAGGAAGGGCTAAGCTTGGAGGAATCCCTGTGGGAATAGTTGCTGTAGAAACACAGACAGTAATGCAAATAATACCTGCTGATCCTGGTCAGCTTGATTCTCATGAGAGGGTTGTTCCTCAAGCCGGGCAAGTGTGGTTCCCTGATTCTGCAACCAAGACAGCCCAAGCAATATTGGATTTCAACAGAGAAGAGCTCCCGCTTTTCATTCTCGCAAACTGGAGAGGCTTTTCAGGAGGGCAAAGGGACCTTTTTGAAGGAATTCTTCAGGCTGGTTCCACTATTGTGGAGAACCTTAGAACATACAAGCAGCCCATATTTGTATACATCCCAATGATGGGCGAACTCCGTGGTGGGGCATGGGTTGTTGTTGACAGTCGAATCAATTCAGACCACATCGAAATGTATGCCGAACGAACTGCCAAAGGTAATGTCCTCGAGCCAGAAGGAATGATTGAGATCAAATTTAGAACAAGAGAACTGTTGGAGTGTATGGGTAGACTTGATCAGCAGTTGATAACTCTGAAGGAAAAACTTCAGGAAGCCAAGAGTAAGAGGGACATCGTGGCCTTTGAATCCCTACAGCAGCAGATTAAATCACGCGAGAAACAGCTTTTGCCTATGTATACCCAGATAGCTACCAAGTTTGCTGAACTGCATGATACTTCCTTAAGAATGGCTGCCAAGGGTGTCATTAGAGAAGTTCTGGATTGGCGTAACTCCCGCTCCGTCTTCTACCTGAGACTGCACAGGAGAATTGGTGAGCAGTCAGTGATCAACAGTGTGAGAGATGCTGCTGGTGACCAATTGTCACATGCATCTGCACTGAACTTGGTCAAAGAATGGTATTTGAATTCTGATGTTGCCAAAGATACAGCAGATGCTTGGTTGGATGATGAAACCTTCTTCAGATGGAGGGATAATCCTGCAAATTACGAGAATAAGCTAAAGGAATTGCGTGTGCAGAAAGTGTTGCTTCAATTAACAAATATTGGTGACTCAGCTCTAGATTTGCAAGCTCTACCTCAAGGTCTTGCTGCCCTTTTAAGCAAGTTGGAGCCATCGGGTCGCTTGAAGTTGACCGATGAACTTCGGAAGGTACTTCTTTAG 5307 0.4285 MVLGLKEIQIRGEIRTNVDYTIDLLNVSDYRENKIHTGWLDSRIAMRVRAERPPWYLSVVGGALYHISLVHSQVSLNIEGSKYTIDMIRGGSGSYKLRMNQSEIEAEIHTLRDGGLLMQASICSLNYLYSDQTISGKGFSKASDNSLVWNILLDGNSHVIYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVADDSHVDADTPYAEVEVMKMCMPLLSPASGIIHFKMSEGQAMQSGELIARLDLDDPSAVRKAEPFTGSFPVLGPPTAISGKVHQKCAASLNAARMILAGYEHNIDEVVQNLLNCLDSPELPFLQWQECLAVLATRLPKDLKNELESKYKEFEGISSSQIADFPAKLLKGIIEAHLSSCPDKEKGAQERLVEPLLSLVKSYEGGRESHAHIIVQSLFEEYLSVEELFSDNIQADVIERLRLQYKKDLLKIVDIVLSHQGIKSKNKLILRLMDKLVYPNPAAYRDQLIRFSLLNHTNYSELALKASQLMEQTKLSELRSNIARSLSELEMFTEDGESIDTPKRKSAINDRMEDLVSAPLAVEDALVGLFDHSDHTLQRRVLETYIRRLYQPYLVKGSVRMQWHRSGLIATWEFYDEYIERKNGVEDQTLNKTVEEKHGEKKWGVMVIIKSLQFLSAIISAALREATNNLHEALTSGSVEPVNYGNMMHIGLVGINNQMSLLQDSGDEDQAQERINKLAKILKEQEVGSTIRAAGVRVISCIIQRDEGRAPMRHSFHWSEEKLYYAEEPLLRHLEPPLSIYLELDKLKAYENIRYTPSRDRQWHLYTVVDHKPQPIQRMFLRTLLRQPTTNEGFSSYQRLDAETSRTQLAMSFTSRSIFRSLLAAMEELELNAHNANIKSEHAHMYLYIIREQQIDDLVPYPKRINIDAGKEETTVEAVLEELAREIHSAVGVRMHRLGVVVWEVKLWMAACGQANGAWRVIVNNVTGHTCTVHIYREKEDTVTHKVVYSSVLVEGPLHGVPVNENYQPLGVIDRKRLSARKNSTTYCYDFPLAFETALEQSWAIQQPGFQRPKDKNLLKVTELKLADKEGSWGTPLVPVERYPGLNDVGMVAWFMEMCTPEFPSGRTILVVSNDVTFKAGSFGPREDAFFRAVTDLACTKKLPLIYLAANSGARLGVAEEVKSCFRVGWSEESNPEHGFQYVYLTPEDYARIESSVIAHELKLESGETRWVIDTIVGKEDGLGVENLSGSGAIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTVSDDLEGVSSILKWLSYVPSHVGGALPIVKPLDPPERLVEYSPENSCDPRAAISGTLDGNGRWLGGIFDKDSFVETLEGWARTVVTGRAKLGGIPVGIVAVETQTVMQIIPADPGQLDSHERVVPQAGQVWFPDSATKTAQAILDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPIFVYIPMMGELRGGAWVVVDSRINSDHIEMYAERTAKGNVLEPEGMIEIKFRTRELLECMGRLDQQLITLKEKLQEAKSKRDIVAFESLQQQIKSREKQLLPMYTQIATKFAELHDTSLRMAAKGVIREVLDWRNSRSVFYLRLHRRIGEQSVINSVRDAAGDQLSHASALNLVKEWYLNSDVAKDTADAWLDDETFFRWRDNPANYENKLKELRVQKVLLQLTNIGDSALDLQALPQGLAALLSKLEPSGRLKLTDELRKVLL 1768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0228 1768 Pfam Biotin-requiring enzyme 188 253 IPR000089 -
Aed10g0228 1768 Coils Coil 858 878 - -
Aed10g0228 1768 PANTHER BNAC06G01580D PROTEIN 1 1767 - -
Aed10g0228 1768 Coils Coil 1564 1584 - -
Aed10g0228 1768 Gene3D Biotin dependent carboxylase carboxyltransferase 1156 1220 - -
Aed10g0228 1768 Pfam Carboxyl transferase domain 1100 1652 IPR034733 -
Aed10g0228 1768 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 1005 1344 IPR011762 -
Aed10g0228 1768 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 1348 1663 IPR011763 GO:0016874
Aed10g0228 1768 SUPERFAMILY ClpP/crotonase 1339 1729 IPR029045 -
Aed10g0228 1768 ProSitePatterns Biotin-requiring enzymes attachment site. 211 228 IPR001882 -
Aed10g0228 1768 ProSiteProfiles Biotinyl/lipoyl domain profile. 180 254 IPR000089 -
Aed10g0228 1768 Pfam Acetyl-CoA carboxylase, central region 254 998 IPR013537 GO:0003989|GO:0005524|GO:0006633
Aed10g0228 1768 Gene3D - 1006 1333 - -
Aed10g0228 1768 SUPERFAMILY Single hybrid motif 186 256 IPR011053 -
Aed10g0228 1768 CDD biotinyl_domain 189 253 - -
Aed10g0228 1768 Gene3D - 1338 1737 - -
Aed10g0228 1768 PANTHER ACETYL-COA CARBOXYLASE, ISOFORM A 1 1767 - -
Aed10g0228 1768 SUPERFAMILY ClpP/crotonase 1008 1334 IPR029045 -
Aed10g0228 1768 Gene3D - 184 255 - -
Aed10g0228 1768 SUPERFAMILY Rudiment single hybrid motif 1 42 IPR011054 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0228 1 1767 Acyl Lipid Metabolism Gene Families AT1G36160 75.265 0.0 2800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0228 K11262 - gmx:100778658 3302.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0228 10 1836252 1851242 Aed10g0228 10 1836252 1851242 ECH