Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0224 ATGTTCAGCATGAGTCAGGAGCTGAAAAAAACTGCCTCTAACGGTCATGAGAAAATACTAACAACATCACAAGAACAACAGGCAAAGATCAATGAGGTGAGAAGGTTGATAGGGCCATTATCAGATAAAGAATCTGTGTACTGTTCTGATGCTTCCATCTCAAGTTATTTAAGGTCACGAAATTGGAATGTGAAGAAAGCATCTCAAATGTTGAAACAGAGCCTGAAATGGAGAAAAGAATACAAACCTGAAGAGATTCGCTGGGAAGAGGTTGCTGATGAAGCAAAGACAGGGATGATGTATAAACCAAATTATCATGACAAGTATGGGAGATCAGTGCTTGTAATGAGACCTTGTGTCCAGAAATCAAAGTCAACACAAGGACAAGTTAAGTATTTTGTATACAGCATGGAGCATGCAATTTTGAATCTTCCACCACAGCAGGAACAAGTGGTGTGGCTCGTAGATTTTCAGAGTTTCAAGCTGTCAGATATATCATTAAAAGTGGCGCGTGAAACTGCCCATATTCTGCAAGAGTACTATCCAAAGCGCCTTGGTTTGATAATACTCTACAATGCACCTATGATCTTCCAACCATTTTTCTCGATGCTAAAGCCCCTTTTAGAGACTGAAACTAGTAACAAAATAAAGTTTGGATATTCAAACGACCACAACACGAAGAAGATTATGGAGGATTTGTTTGATAAGGATAATCTTGAATCTGCATTTGGTGGGAATGGTGAGACAGGAGTTGACATAAAGAAATATGCAGAGATAATGAAAGAGGATGACAACAAGAAACACTCTTTCTGGACACAGCAGGCCAAGTCTGTATCACTATCATCAGTTGCACTTGCTTTAGATTCAATCAGGTTAGGTGCAGATTCTGATGCTGCTTCTAACAATGAGAAAAATTAA 918 0.3889 MFSMSQELKKTASNGHEKILTTSQEQQAKINEVRRLIGPLSDKESVYCSDASISSYLRSRNWNVKKASQMLKQSLKWRKEYKPEEIRWEEVADEAKTGMMYKPNYHDKYGRSVLVMRPCVQKSKSTQGQVKYFVYSMEHAILNLPPQQEQVVWLVDFQSFKLSDISLKVARETAHILQEYYPKRLGLIILYNAPMIFQPFFSMLKPLLETETSNKIKFGYSNDHNTKKIMEDLFDKDNLESAFGGNGETGVDIKKYAEIMKEDDNKKHSFWTQQAKSVSLSSVALALDSIRLGADSDAASNNEKN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0224 305 SUPERFAMILY CRAL/TRIO domain 88 266 IPR036865 -
Aed10g0224 305 MobiDBLite consensus disorder prediction 1 25 - -
Aed10g0224 305 CDD SEC14 88 246 IPR001251 -
Aed10g0224 305 SMART sec14_4 94 248 IPR001251 -
Aed10g0224 305 Gene3D - 2 292 IPR036865 -
Aed10g0224 305 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 4 301 - -
Aed10g0224 305 PANTHER GH16843P 4 301 - -
Aed10g0224 305 Pfam CRAL/TRIO domain 97 245 IPR001251 -
Aed10g0224 305 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 88 251 IPR001251 -
Aed10g0224 305 SUPERFAMILY CRAL/TRIO N-terminal domain 21 90 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0224 Aed-Chr10 1813855 1818490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0224 52 216 Acyl Lipid Metabolism Gene Families AT5G47730 27.895 3.30e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0224 - - gmx:100777065 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0224 10 1813855 1818490 Aed10g0224 10 1813855 1818490 ECH