Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0207 ATGGCAATGCAGCAGGCAGGGGAACTCTGTCAGCAACAAAATCCACATTCTGCTCCCATTTCCTTCAATCCGATTTCCGATTTGGGTTCCTTGAGCGGAGGGTTGTTTCTGGAGCCTAAAATCCCCGATTCGTTTGTTCGTTCCATTTCGTTGAAGATTCACGCCACTCCCTTTTCCGAATCCAATCCTCGCCGCCATCGGAGAAGGGTTCCGTCCGGGTGCTTTCTATCGGTGAGCTTGCCCACTGCAAAACTCGTCACCGAACCCAAACTTCAAAATGGTGAACACGTCTCCGACCAGGAAACAACCTCCAACGACGTCGTTCAGCAAACAAAAAAGATTAGGGTTAGGGTACGAGGAGGCAATGCCATCAACACCACCAAACATCTCTGGGCCGGTGCTATAGCCGCCATGGTCTCTAGAACTTGTGTGGCTCCACTTGAAAGGCTTAAGTTGGAGTACATAGTTCGTGGTGAGAAGAGGCATATATTGGAGCTTGTTAGCAAAATTGCATCTTCTCAAGGGTTGAGAGGCTTTTGGAAAGGGAACCTTGTAAATATTCTGCGGACAGCTCCATTCAAAGCGGTTAATTTTTGTGCTTACGATACTTACAGAAAGCAGTTGCTTAGATTTTCTGGGAATGGGGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGAATTACTGCTACCATTATTTGCCTTCCACTTGACACTATCCGGACCAAGTTGGTGGCACCTGGTGGAGAAGCTTTGGGTGGGGTAATTGGTGCTTTCCGATACATGATTCAAACTGAAGGCTTCTTTTCTCTTTACAAGGGCTTAGTACCATCCATTATAAGTATGGCTCCTTCTGGTGCAGTTTTTTATGGTGTATATGATATACTGAAATCAGCTTATCTGCATTCACCGGAAGGAATGAAGAGAATCCAGAATTTGCATAAACAGGGTCAGGAACTGAGTGCCTTTGATCAGCTTGAGTTGGGGCCAGTAAGGACATTGTTGAATGGGGCTATTGCTGGTGCATGTGCAGAAGCTGCTACATATCCATTTGAAGTGCTGAGGAGGCAACTTCAATTGCAAGTCCAGGCTACTAAATTAAGTACTTTTGCAACATTTGTCAAAATAGTTGAACACGGAGGTATTCCTGCTCTCTATGCAGGACTTGTTCCCAGCTTATTACAGGTACTTCCTTCAGCTTCAATAAGTTACTTTGTCTATGAGTTCATGAAGATTGTTTTGAAAGTGGAGTAG 1263 0.4513 MAMQQAGELCQQQNPHSAPISFNPISDLGSLSGGLFLEPKIPDSFVRSISLKIHATPFSESNPRRHRRRVPSGCFLSVSLPTAKLVTEPKLQNGEHVSDQETTSNDVVQQTKKIRVRVRGGNAINTTKHLWAGAIAAMVSRTCVAPLERLKLEYIVRGEKRHILELVSKIASSQGLRGFWKGNLVNILRTAPFKAVNFCAYDTYRKQLLRFSGNGETTNFERFIAGAAAGITATIICLPLDTIRTKLVAPGGEALGGVIGAFRYMIQTEGFFSLYKGLVPSIISMAPSGAVFYGVYDILKSAYLHSPEGMKRIQNLHKQGQELSAFDQLELGPVRTLLNGAIAGACAEAATYPFEVLRRQLQLQVQATKLSTFATFVKIVEHGGIPALYAGLVPSLLQVLPSASISYFVYEFMKIVLKVE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0207 420 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 302 IPR018108 -
Aed10g0207 420 SUPERFAMILY Mitochondrial carrier 122 413 IPR023395 -
Aed10g0207 420 PANTHER SOLUTE CARRIER FAMILY 25 26 420 - -
Aed10g0207 420 ProSiteProfiles Solute carrier (Solcar) repeat profile. 331 416 IPR018108 -
Aed10g0207 420 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 26 420 - -
Aed10g0207 420 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 207 IPR018108 -
Aed10g0207 420 PRINTS Mitochondrial carrier protein signature 129 142 IPR002067 GO:0055085
Aed10g0207 420 PRINTS Mitochondrial carrier protein signature 142 156 IPR002067 GO:0055085
Aed10g0207 420 PRINTS Mitochondrial carrier protein signature 182 202 IPR002067 GO:0055085
Aed10g0207 420 PRINTS Mitochondrial carrier protein signature 275 293 IPR002067 GO:0055085
Aed10g0207 420 PRINTS Mitochondrial carrier protein signature 340 362 IPR002067 GO:0055085
Aed10g0207 420 PRINTS Mitochondrial carrier protein signature 232 250 IPR002067 GO:0055085
Aed10g0207 420 Pfam Mitochondrial carrier protein 331 417 IPR018108 -
Aed10g0207 420 Pfam Mitochondrial carrier protein 124 209 IPR018108 -
Aed10g0207 420 Pfam Mitochondrial carrier protein 217 304 IPR018108 -
Aed10g0207 420 Gene3D Mitochondrial carrier domain 120 419 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0207 Aed-Chr10 1651173 1654966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0207 202 414 Organic Solute Cotransporters AT5G64970 19.718 2.08e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0207 - - gmx:100812227 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0207 10 1651173 1654966 Aed10g0207 10 1651173 1654966 ECH