LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed10g0200	ATGGCGACGCCGCCGGAACCGCTACCGGAGCCCTTCTCCGACCCCATCGAGTCTCTTCCGCACGTCGACCTCCGCCTCCTTTCTCAACCCGAACTCTACACCCTCTCCCTCTCTGGCGCCACTCACCGCCACCGCCGTAACAGCGACAACGACGACTCCGTGATTCCCAAAATCGACCGTTCCAATTTCAACGAATCCGCCGGCAGCCGCAAACAGACCTACTCCAAACTCCGCCTCAACAAGCGGAAACAAAATCCCGCGGTTCTCGCCTCCTCCTCCTTCCACATTCCCCTCCGCATTCCGGAGCCCGAGGACGAGGAAAACTCCCGAATTATCGCCCTGCTGCAGCAACTCTTCGGCGTCGAGCCTCTCCGCAGCGCCCCGCGCAACGATGCGGCGGAGCGTCGCCTCGCTCCCGTCCAGGTTGACTTCAAGCAACCGCCTTCGGAATCCGCGGCATTCCAGAACGTTCCGATTGACGTCGAGGATGCCAATCAGAGGAAGCGGAAGCGCGGGCGGCCGCGGAAGAACGAGAATTCGTTAACGGTTTTTGTTGAGGAACCAAAGGAGGTCACCAAGGAGGAGAATTCGTTAATGGTTTTCATTGAGGAGCCGAAGAAGGCTAACGGTAACGGCGAGGGGATCGCGGCGGCACCGGTTAATGAGAGGGATTCTGTTGCTGACGCTGTTGGATTGGATATGGATGCATTTGAGGAGGAGCTGAAGAGGAGGACCCAAGGGTTGGAGACGGAGCCTCAAGTGTTGGAATTTTTGGAGAGTTTGAATGGAGAGTGGGCGAGTCAGAGGAAGAAGAGGAGGATTGTGCCGGCCACTGAACTTGGCGACTTGTTGCCTGCGGGATGGAAGATCGTGATAAATGTTATGAGGAGGGCAGGGCATGCTTCCGCTGTTTGTCGCCGTTACGTAAGTCCTGTTGGACACCAGTTTGAGTCATGCAAAGAAGCTTCTGCATACTTGCTTTCTGTTTCTGGTGTTCAAGATAGAAGCCATTTAAAATCTAGTTATACTGATGGTGCTCAGCAATTGACCTGTAGTATGAACGTGGCATCTGAAAGTATTGTTGGTCATGTCCCTACTGGAGACATGAAGACTGATGCCAACGCAAGTTGTTTGTCTTCAGTTGGTGCATCTATACACTCTAGTCATGAGAAGCAGCCCCCCTTATCATCAGCAATTGGGAGTGAAAATTTCAATGGTGATCTGGCTTTGGGTTGTAAATTAGGAGATGCTACTGGTGTAGCCTTTAGAGACTTTGACCATCAAACTGAAGATAAAGAACAATCGAAGGCTGATAAGAATGATGGAAATTCAGTTCAGGAATGTTCTCTTGTGGAAGATAGAGTTTGTAATGTAAACGGTGAGAAGTTGATTGGTGCTATTGAGTCTAGTGATGTTGCATGCAATCTTTATATTCCTTTGGTTTTCTCAACTCCTTTGTCCAATAATAATAATAGTAACAATGGTCAATTTTCAGATGAAATAAATGCTTCCACATGCATAAAAGGTGGCATTAGTAATTTTGCTAGTCACGATAGAAATACTGGATGCTATGAAACTGTTCCTTGTGGAAATGAGCAAGCTCATGTTGATAACAACGGTCTTGGGCTTTCTGTGAAATCAGTGGAAGAGAACATTCAGAAAATAAGTTTGGAAAGCAGCATGCTGGCTCCAAGTTCTGAGGGGAAAATACTTGCTGGAAAAAATTTAGAGGATAGACATCTTATCAGTTCACTAGAGGATACAGAGATTGGAGATGGAAAGGCCCTTAAGGATGACAAACAACAAATTATTTGTAGCAGAGACCACACTGAAATTAAAGATGTTTCTACTGATGTTAAACTGCAGAGTATTTCTGAGGGTTGTTCACTTGTCTTGTCACATAATGAACTTAAGACATCTGTAAGTAATATGGACAGGACACAGACTTCTGAGCTGAAGGACTCTGCTGGGGAAAATATTTTTGATAGTGATTTATTTAGCTCATCTATTGATGAAAGAACCCGTGTTCACAGTGATTACATGAGTAATGTTTCTTTTAGCTCTTGCACACAAGATGCATCTGAGTATGGTGGATTTGATTTTGCTTCTGATCTTAAATTAACTAAGGATGTTAGTGATAATCATATTCTTTCAAATGAGGAAGCTGTGACAAGGTGTTCCCAGGAAAGGAGTTCCTTGAATGACCAAAATAATCATAATCTGTTGCACAAAAGTTCTCAAAGTAACTTATTTGCTCTAACTGGTAATCAGCACTCTTGTGCTTTTCATGATAATAATGTAAATATCTCTGATGGAACCTTTGATGCACTCAAATCTGTTGATGCTGGTTGCATGGAGCCTCAGTTGGGCATTGTGTCTTGCAGCAATATTGCTGTAGATGCATATACTACTGCAAGCATTATGCAGGGAAAATCACAAGGGTGTGTATCTGTTCCTCTTGGTGGGAGTGTATTAAACTTTGAGAAGCCAAGTGACGATGGTGTTAATAAGGCAAATGAATCCTGCTTACCAGTGACAGCTCAGAATGAAGTTGAAATATTCCAAACTGACTCTATGGAGTGTGCTGGGAACCACAAGGCTCTGCTTGTATATTCTCAATTTCCTATTGAAGATGATAAGCTAGAAAAGGGAAGCAAAAACATGGTCCATGATGGACAGACCTATGCTAGCGCATCGATGAATGTGATGCAGTGGCTGAGATCAACTCCTTATGCGAACAAGTTTTTGACAGTTGAATTGCAGGATGGGGGAAATGAGGTGGTGGGGTTGTTCGGCTGA	2799	0.4534	MATPPEPLPEPFSDPIESLPHVDLRLLSQPELYTLSLSGATHRHRRNSDNDDSVIPKIDRSNFNESAGSRKQTYSKLRLNKRKQNPAVLASSSFHIPLRIPEPEDEENSRIIALLQQLFGVEPLRSAPRNDAAERRLAPVQVDFKQPPSESAAFQNVPIDVEDANQRKRKRGRPRKNENSLTVFVEEPKEVTKEENSLMVFIEEPKKANGNGEGIAAAPVNERDSVADAVGLDMDAFEEELKRRTQGLETEPQVLEFLESLNGEWASQRKKRRIVPATELGDLLPAGWKIVINVMRRAGHASAVCRRYVSPVGHQFESCKEASAYLLSVSGVQDRSHLKSSYTDGAQQLTCSMNVASESIVGHVPTGDMKTDANASCLSSVGASIHSSHEKQPPLSSAIGSENFNGDLALGCKLGDATGVAFRDFDHQTEDKEQSKADKNDGNSVQECSLVEDRVCNVNGEKLIGAIESSDVACNLYIPLVFSTPLSNNNNSNNGQFSDEINASTCIKGGISNFASHDRNTGCYETVPCGNEQAHVDNNGLGLSVKSVEENIQKISLESSMLAPSSEGKILAGKNLEDRHLISSLEDTEIGDGKALKDDKQQIICSRDHTEIKDVSTDVKLQSISEGCSLVLSHNELKTSVSNMDRTQTSELKDSAGENIFDSDLFSSSIDERTRVHSDYMSNVSFSSCTQDASEYGGFDFASDLKLTKDVSDNHILSNEEAVTRCSQERSSLNDQNNHNLLHKSSQSNLFALTGNQHSCAFHDNNVNISDGTFDALKSVDAGCMEPQLGIVSCSNIAVDAYTTASIMQGKSQGCVSVPLGGSVLNFEKPSDDGVNKANESCLPVTAQNEVEIFQTDSMECAGNHKALLVYSQFPIEDDKLEKGSKNMVHDGQTYASASMNVMQWLRSTPYANKFLTVELQDGGNEVVGLFG	932

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed10g0200	932	MobiDBLite	consensus disorder prediction	42	58	-	-
	Aed10g0200	932	SUPERFAMILY	DNA-binding domain	280	329	IPR016177	GO:0003677
	Aed10g0200	932	ProSiteProfiles	Methyl-CpG-binding domain (MBD) profile.	274	347	IPR001739	GO:0003677
	Aed10g0200	932	PANTHER	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	15	826	IPR037472	-
	Aed10g0200	932	MobiDBLite	consensus disorder prediction	59	74	-	-
	Aed10g0200	932	Pfam	Methyl-CpG binding domain	283	326	IPR001739	GO:0003677
	Aed10g0200	932	MobiDBLite	consensus disorder prediction	147	179	-	-
	Aed10g0200	932	PANTHER	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	15	826	-	-
	Aed10g0200	932	MobiDBLite	consensus disorder prediction	38	74	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed10g0200	Aed-Chr10	1586035	1595323	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed10g0200	-		-	gmx:100780637	1392.1

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed10g0200	10	1586035	1595323	Aed10g0200	10	1586035	1595323	ECH