Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0197 ATGGCTTGGCGCTTGTTCTCGTTCGTCTCCTCCAAAATCCTAAACCCTAACAACAACCTCTCTTCCTTCACCGCCCCATTTTCCACCTCCTTCTTGGTCACCAAAACCCCCAAAAAATTCAAGAAAAAACACAAACCCAAACCCAGCCCGCGAACCACCCCGGTCCAGACCGAACCGAACCGCATCCCCCATTTCGAACGCATTCTCCGCCGCGACGCCCTCCTCCGCTTCGTGACCCGCTCAAAGCAGTTCCTCTCCGCCCAGCCGGAGCACGTCCTCCGCCTCGACGACGCCGGCAAGCTCCACCGCGAGCTCGGCTTCCCGCGCGGCCGCAAAGTCTCCCGCTTCCTCCAGCGCCACCCCCTCCTCTTCCAGACCTACCGCCACACCGACGCCAAAACCTGGCTCGGCTTCACCGACCTTATGGAGGACCTCCTCGCAGAGGAACGCTCCCTCATGGACGCAATTGAACTCAACCGCGTCGAGAAGGTTCGGAAGCTTCTCATGATGTCCGCGCGCAACCGCATCCCCCTCAGCAAGATTCACCACTGCAGAACCCTATTCGGCATCCCCGACGATTTCCGCGATAGGGTTTCCAAATACCCTAATTATTTCAAAATTGTGGTTGAAAACGACGGGAAGAGGGTGCTCGAGTTGGTTAACTGGGACCCACTCCTCGCAGTGAGTGCGCTCGAGAAAGAGTTCGTGGTGGACGAGGATTCCGCGAAGAGGAAGTTTAGGTTTCCGGTGAAGTATGGGAAGGAATTGGATTTAGAATTGGATGATAGTAGGAAGCTTAATTTGCTAAACGCGCTTCCTTTGGTGTCTCCCTATTCGGATGGGAATAAGTTTGATGTGTGGACGTTGGAGGCGGAGAAGTATAGGGTTGGGGTGATTCATGAGTTCTTGAGCTTGACTTTGGAGAAGAGGGCTTCGATTCATCACCTTGTGGAGTTTAAGGAGGAGTTTTGTTTGACTAAGCATACTTATATGATGCTGCGGAAGCAGCCGCGAGCATTTTACTTGGCCGGAACTGAGATGAATTGGGGCTTGTTCTTGAAGGATGCTTATGATGGGAATGGGGTTTTGCTTGAAAAGGATCCCCAGGTGGTGTTTAATGAGAAGCTTTATAAGTATGCGCAGGTGGATCAAATGGAACCCGGTTCTGATGAAGAGGAGCAGCATTTTACTTGA 1194 0.5285 MAWRLFSFVSSKILNPNNNLSSFTAPFSTSFLVTKTPKKFKKKHKPKPSPRTTPVQTEPNRIPHFERILRRDALLRFVTRSKQFLSAQPEHVLRLDDAGKLHRELGFPRGRKVSRFLQRHPLLFQTYRHTDAKTWLGFTDLMEDLLAEERSLMDAIELNRVEKVRKLLMMSARNRIPLSKIHHCRTLFGIPDDFRDRVSKYPNYFKIVVENDGKRVLELVNWDPLLAVSALEKEFVVDEDSAKRKFRFPVKYGKELDLELDDSRKLNLLNALPLVSPYSDGNKFDVWTLEAEKYRVGVIHEFLSLTLEKRASIHHLVEFKEEFCLTKHTYMMLRKQPRAFYLAGTEMNWGLFLKDAYDGNGVLLEKDPQVVFNEKLYKYAQVDQMEPGSDEEEQHFT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0197 397 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 1 389 IPR045040 GO:0003723
Aed10g0197 397 Pfam Plant organelle RNA recognition domain 61 382 IPR021099 GO:0003723
Aed10g0197 397 PANTHER OS09G0473400 PROTEIN 1 389 - -
Aed10g0197 397 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0197 Aed-Chr10 1572372 1573565 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0197 - - gmx:100813429 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0197 10 1572372 1573565 Aed10g0197 10 1572372 1573565 ECH