Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed10g0186 | ATGGATAAAAGCTGTCATCCCTCTGCAGACTCTACTAATACTAGTATAACCACATCCGCTGCTGCTGCTGCCTCTGCTGCCAACAACAACAACAACAGGGATCAATATCTTAGGCACCTGAACAAGCTTTCTCAAAAGATCTCCAAGCCCCTCGTTAAGAAACCCACTTTCCACCCTTCACAGGCCCAGGCCCAGGCCCAAAACGATCAGGTGCAGGCGCAGCAGAACCTTCAGCATCAGCCGCCGGTGTACAACATCAACAAGAACGACTTCCGTGATGTTGTTCAGAAACTGACGGGCTCGCCTGCCCATGAGCGCATGTCAACTGCACCGCCTCCCATTCAGCAGCCCAAGCCTCCAAGCTCCCGCCTGCAGCGGATTCGCCCTCCTCCCCTGCCGCAAATTACTAATCGCCCACCCCCGCTCCTCAACCGCCCTCAACTCCCTAACGCCGTTTCCTTCAGCAGCAACTTCTCCTCCTCCTCCGTCTTCTCCAGACTCCCCGCGCCTTCATCTCCTCTGCCTCCGTTCCCCACCGTCCATGCACCTGCTGAGTCACCTATCTCCGCCTACATGCGCGATCTGCAGAATCTCGTCGACGCCAACACCAAGCACTTTCCAGGGTTTGCGCTACCACCACCGCCTCAGCCTCAGGTTCAGGTTCCACCTCAGCCTCAGCCTCAGCAGGAACAACAACCTCAGCAGCAGGCGATGGTTGTTGCATCTCAAGCGGCGTTTCAGATGCCGTCCTCGCCTGGGCCGTTTGGTTGTTTGAATTCGCAGCTGGCGTCGTACCCTCTGCTCTCGCCAGGGCTTCTGTTTTCCCCAACCTCTGGTCAGTTAGGGTTTCCGCAGCTTCCGCTGTCGCCCACCGTGCCGGTTCCCAGCCCTCGTTGGAAGGGAATTTGA | 909 | 0.5732 | MDKSCHPSADSTNTSITTSAAAAASAANNNNNRDQYLRHLNKLSQKISKPLVKKPTFHPSQAQAQAQNDQVQAQQNLQHQPPVYNINKNDFRDVVQKLTGSPAHERMSTAPPPIQQPKPPSSRLQRIRPPPLPQITNRPPPLLNRPQLPNAVSFSSNFSSSSVFSRLPAPSSPLPPFPTVHAPAESPISAYMRDLQNLVDANTKHFPGFALPPPPQPQVQVPPQPQPQQEQQPQQQAMVVASQAAFQMPSSPGPFGCLNSQLASYPLLSPGLLFSPTSGQLGFPQLPLSPTVPVPSPRWKGI | 302 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed10g0186 | 302 | PANTHER | VQ MOTIF-CONTAINING PROTEIN 9 | 1 | 301 | IPR039824 | GO:1901001 | |
| Aed10g0186 | 302 | MobiDBLite | consensus disorder prediction | 102 | 140 | - | - | |
| Aed10g0186 | 302 | MobiDBLite | consensus disorder prediction | 112 | 140 | - | - | |
| Aed10g0186 | 302 | MobiDBLite | consensus disorder prediction | 58 | 75 | - | - | |
| Aed10g0186 | 302 | MobiDBLite | consensus disorder prediction | 7 | 42 | - | - | |
| Aed10g0186 | 302 | Pfam | VQ motif | 79 | 104 | IPR008889 | - | |
| Aed10g0186 | 302 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
| Aed10g0186 | 302 | MobiDBLite | consensus disorder prediction | 204 | 235 | - | - | |
| Aed10g0186 | 302 | MobiDBLite | consensus disorder prediction | 208 | 229 | - | - | |
| Aed10g0186 | 302 | PANTHER | PROTEIN HAIKU1 | 1 | 301 | IPR039612 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed10g0186 | Aed-Chr10 | 1479453 | 1480361 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed10g0186 | - | - | gmx:100777442 | 332.413 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aed10g0186 | 10 | 1479453 | 1480361 | Aed10g0186 | 10 | 1479453 | 1480361 | ECH |