Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0181 ATGTTTCGAGGGATGAGCGTGGAGGCTCCCATGAGCTGGTCTTGTTGGTGTTTCAAAACAAACAATATTACAAATAAGGTGCGAGCGCCACACTCACACCCTCATAGCCGCCAAGGATATACTACCGCCATGGCGCTTACTTTCGAGGTTCTTGGCAGATTCAACCGTGCTCGCGCTGCTCGGTTGACACTCCCTCATTTTGTGTGCCAAACTCCCTTGTTTATGCCTGTGGGCACACAAGGAACAATAAAGGGATTGACAAATAGTCAGCTTGAGGATATTGGCTGCCAAATAATACTTGGAAATACATATCACTTGGCCCTTCGACCTACTTCTGAGCTTCTTGATGAAGTTGGTGGTCTTCATAATTTTATGAATTGGAAACGGGCTCTGCTGACAGACTCTGGTGGCTTTCAAATGGTTTCGCTGCTGCATCTTGCTGATATCACTGAAAAAGGTGTGACATTTCAGTCACCAGTAGATGGAAAACCAATGCTTCTAACACCTGAGGAATCAATTCAAATCCAAAATAGAATTGGAGCAGATATCATTATGGCTCTCGATGATGTTGTAAAGACCACCATTACTGGTCCACGAATAGAGGAAGCTATGTATCGAACACTTAGATGGATAGACAGATGTATAGCAGCTCACAAGAGACCTCATGATCAGAACTTGTTTGGTATTGTGCAAGGTGGTTTAGATCCTGTATTGAGGGAGACCTGTGTCAGAGGTTTGGTGGAGCACAATTTGCCTGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAAATTCATTTTGGCGAGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAGGATAAACCACGATATGTTATGGGAGTTGGTTATCCACTTGATATTGTTGTTTGTAGTGCTTTGGGTGCTGATATGTATGACTGTGTGTATCCTACCCGCACAGCACGCTTTGGCACTGCTCTCGTTCCTGAGGGAGTATTGAAACTAAAACACAGAGCAATGGCTGATGACACCCGTCCAATTGATTCTACTTGTGCTTGTATGGTTTGCAAGAACTACACCAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCAATGGGGTCTCAACTTTTGTCATACCATAATTTATACTACATGTTGCAGCTCAGTAGGAATCTACACTCTTCAATAGTTGAAGGAAGGTTCCCAGAGTTTGTATGTGACTTTCTAAGCAAAATGTTCCCGAAAGGCGATGTTCCTGAATGGGTGTGCGATGCTATGGAGGTGGCTGGAATTGATATTTCTTCCTGCTGTGCTGAGTTTTCATCAAGCCAAGAATATGATTCCAAAAGTATGACTGAAGAGGAAGAAGTTAGTTTAGTGAGGTAA 1374 0.4381 MFRGMSVEAPMSWSCWCFKTNNITNKVRAPHSHPHSRQGYTTAMALTFEVLGRFNRARAARLTLPHFVCQTPLFMPVGTQGTIKGLTNSQLEDIGCQIILGNTYHLALRPTSELLDEVGGLHNFMNWKRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRIEEAMYRTLRWIDRCIAAHKRPHDQNLFGIVQGGLDPVLRETCVRGLVEHNLPGYAIGGLSGGEDKNSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHRAMADDTRPIDSTCACMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMLQLSRNLHSSIVEGRFPEFVCDFLSKMFPKGDVPEWVCDAMEVAGIDISSCCAEFSSSQEYDSKSMTEEEEVSLVR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0181 457 SUPERFAMILY tRNA-guanine transglycosylase 44 406 IPR036511 GO:0006400|GO:0016763
Aed10g0181 457 TIGRFAM Q_tRNA_tgt: tRNA-guanine transglycosylase 48 408 IPR004803 GO:0008479|GO:0101030
Aed10g0181 457 Hamap Queuine tRNA-ribosyltransferase [tgt]. 46 407 IPR004803 GO:0008479|GO:0101030
Aed10g0181 457 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 48 408 IPR002616 GO:0006400|GO:0016763
Aed10g0181 457 Gene3D - 43 409 IPR036511 GO:0006400|GO:0016763
Aed10g0181 457 Pfam Queuine tRNA-ribosyltransferase 56 408 IPR002616 GO:0006400|GO:0016763
Aed10g0181 457 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 42 432 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0181 K00777 - gmx:100819664 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0181 10 1441255 1448021 Aed10g0181 10 1441255 1448021 ECH