Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0177 ATGGCATTCTCTAGTGCTGCTTTGGTTTTGGGGTCATTGCTAGCAATAAACATGGCTCTGCCAACACTGGCAACCGTGTACACCGTGGGAGATACTTCAGGTTGGGCAATTGGTTCTGATTATACCACATGGACCGGTGGCAAAACCTTTTCAGTCGGTGATACTCTCGCAGTGTTCAACTATGGAGCTGCACACACAGTGGATGAAGTTAAAGAGAGTGACTACAAGTCCTGCACTGCAGGGAATTCGATTAGCACAGACAGTAGTGGCGCCACCTCAATTGCTCTAAAGACTGCAGGAACTCATTACTTCATATGTTCTGTTCCGGGACATTGTTCTGGCGGCATGAAACTCGCCGTCACTGTTAAATCCGGAAAGGCTTCACCTTCTGATGCCGCCGCCGCCACCACCACCACTACCGGAACTAAATCAAACTCTTCTTCTTCTTCTTCTTCAGCGAGTAGTATCTCTCTCTCACCAATTGTTGCCACGTTGATTGTTTCGTGGGTCTCTTACTATGTTTTGCGTATGGTATAA 537 0.4749 MAFSSAALVLGSLLAINMALPTLATVYTVGDTSGWAIGSDYTTWTGGKTFSVGDTLAVFNYGAAHTVDEVKESDYKSCTAGNSISTDSSGATSIALKTAGTHYFICSVPGHCSGGMKLAVTVKSGKASPSDAAAATTTTTGTKSNSSSSSSSASSISLSPIVATLIVSWVSYYVLRMV 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0177 178 Gene3D - 23 129 IPR008972 -
Aed10g0177 178 SUPERFAMILY Cupredoxins 24 122 IPR008972 -
Aed10g0177 178 PANTHER BLUE COPPER PROTEIN-LIKE 13 174 - -
Aed10g0177 178 ProSitePatterns Type-1 copper (blue) proteins signature. 100 116 IPR028871 -
Aed10g0177 178 CDD Phytocyanin 25 122 - -
Aed10g0177 178 ProSiteProfiles Phytocyanin domain profile. 25 124 IPR003245 GO:0009055
Aed10g0177 178 Pfam Plastocyanin-like domain 36 116 IPR003245 GO:0009055
Aed10g0177 178 MobiDBLite consensus disorder prediction 130 154 - -
Aed10g0177 178 PANTHER BLUE COPPER PROTEIN 13 174 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0177 Aed-Chr10 1415703 1416627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0177 32 124 Miscellaneous Gene Families AT1G22480 70.968 3.63e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0177 - - gmx:100306522 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0177 10 1415703 1416627 Aed10g0177 10 1415703 1416627 ECH