Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0166 GGCAAACAAAGTCAACGAATCAGCACCGTCCATCTGGCCAGAGATGGTGAACCGCTTCTTCTCCGGCGCAATCAGACGGTATCTTCTCTCCCCCGCTTTCTGATTATTATCATTTATCAACTTATCAATTTTCGCTCCATCAGTTTTGTGTTCGGCGCGCGAACTCTGTGTAGCTCCGAAGCTTCTCGCGCTTCCGCGTTCCCCGTGCCGTTCGCGCGCAAACTCAAATCCCCAAAGCAGAGTCCATTGCCAGCGCTTCAAAATTGGGTGGACCAAGGCAACGATGTTTCACCCTTTCAGCTCAGAAGCATCGCCAGAAACCTCGTCAAATCGAAGCGCTACCACCACGCCCTCGAGGTGTTTAAATGGATAGAAAACCAGAAGAATTTCCATATGATCCCAGCTGATCATGCTATGAAATTGGAGTTAATTGTTGAAAATTATGGTCTAATGGAAGCTGAGGAATATTTTATGAATCTACCTGACTCAGCTGCAAAGAAGGCTGCCTGTCTTACACTTCTCCGTGGCTATATAAGAGATAGGGACACTAGTAAAGCCGAGACTTTCATGGTGAAGCTCTATGAACTGGGGCTAGTGGTGACTCCTCATCCTTTTAATGAGATGATGAAACTATATCTAGCAGCATGTGAGTACAGGAAGGTACCCCTTGTTATCCAGCAAATGAAGCGAAATAAAGTACCTTGCAATGTTCTATCCTACAACCTTTGGATGAATGCTTGTAGTGAGGAAGAAGGATATGGGGTTGCAGCAGTAGAGACAGTTTTTAGAGAAATGCAAAATGACGAGAATGTTGAAGTGGGATGGAGCAGTCTTGCGACATTAGCCCATGCTTATAAGAAAGCTGGACAATCTAAGAAAGCCATTTTGGTTCTCAAAGATGCTGAAAATAAACTATTTACCTGTAACCGTCTTGGTTACTTCTTCCTGATAACACTATATGCTTCTTTGAAGGAAAAGGAAGGAGTCTTGCGGTTATGGGAAGCTAGTAAGGCAGTTGGTGGAAGAATCAGTTGTGCCAACTACATTTGCATACTAACAAGCTTGGTGAAGCTTGGGGACATTGTAGAAGCCAAGAGAATCTTCTTAGAATGGGAATCTAATTGTCGGAAGTACGACATCAGAGTCTCTAATGTTCTTTTGGGTGCATATGTGCGGAATGGATTAATGGAAGAAGCTGAATCATTACATCTCCACACATTGCAAAAGGGTGGTTGTCCAAACTACAAGACAATGGAAATTCTCATAGAAGGATATGTGAATAGGCAAAAAATGGATGAGGCTATTATTGCTATGAAAAGAGCTTTGGCTATGATGAGAGATTGCCATTGGAGGCCGCCACAGGGACTTGTGTTAGCCATTGCAGAGTATTTGGAGAAAGATGGGAATCTTGAATATGCAAACAAGTATATTACAGATATCCATAATTCTGGTCTTGTTAGTTTACCATTGTATAAAATATTGCTTAGAATGCACATTTCTGCCAACAAACCACCTTTCCATATCCTTAAAATGATGGATGAAGATAAAGTTGAGATGGATAATGAGACACATTCCATTGTTAAAGCTTTCACTGGGTAG 1599 0.4234 GKQSQRISTVHLARDGEPLLLRRNQTVSSLPRFLIIIIYQLINFRSISFVFGARTLCSSEASRASAFPVPFARKLKSPKQSPLPALQNWVDQGNDVSPFQLRSIARNLVKSKRYHHALEVFKWIENQKNFHMIPADHAMKLELIVENYGLMEAEEYFMNLPDSAAKKAACLTLLRGYIRDRDTSKAETFMVKLYELGLVVTPHPFNEMMKLYLAACEYRKVPLVIQQMKRNKVPCNVLSYNLWMNACSEEEGYGVAAVETVFREMQNDENVEVGWSSLATLAHAYKKAGQSKKAILVLKDAENKLFTCNRLGYFFLITLYASLKEKEGVLRLWEASKAVGGRISCANYICILTSLVKLGDIVEAKRIFLEWESNCRKYDIRVSNVLLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTMEILIEGYVNRQKMDEAIIAMKRALAMMRDCHWRPPQGLVLAIAEYLEKDGNLEYANKYITDIHNSGLVSLPLYKILLRMHISANKPPFHILKMMDEDKVEMDNETHSIVKAFTG 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0166 532 Gene3D Tetratricopeptide repeat domain 71 255 IPR011990 GO:0005515
Aed10g0166 532 PANTHER OS02G0796400 PROTEIN 71 530 - -
Aed10g0166 532 Gene3D Tetratricopeptide repeat domain 276 467 IPR011990 GO:0005515
Aed10g0166 532 Pfam PPR repeat 384 403 IPR002885 -
Aed10g0166 532 PANTHER OS12G0527900 PROTEIN 71 530 - -
Aed10g0166 532 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 379 413 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0166 Aed-Chr10 1318589 1320880 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0166 75 452 EF-hand Containing Proteins AT1G02150 32.190 4.28e-72 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0166 - - gmx:100803685 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0166 10 1318589 1320880 Aed10g0166 10 1318589 1320880 ECH