Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0131 ATGCGTTCATTGGTTCGGAAGGGAAGAAGCATGACATGCCTATGCCTTACTCATTCACTCACTCAAACCCATAACCATAACCATACCCTCCTCTCTTCTTCTCTCCATAATAATAATAATAATACTAACCGTAACCCCCTCTTTCAATTATTCTCCGGTATTCTCCGACCTCGAATTCGAGCATTTTCTACCAACTTCAGGAGCGGGCCCACACCAACTGCTTCTTCTTCTTCAGGCTTGCCCCAAAGCATGGCGAATTTCGACGCTGATTCCGTCACTTATCTGACGCAGCGAGATGCCGCTGAGATCGACGACACACTCATGGGTCCACTTGGCTTCACCGTTGACCAGCTCATGGAATTGGCTGGTTTGAGCGTCGCCATTTCCATTTCTGAGGTTTACAAACCGAGTGAGTATAGTCGTGTTCTTGCTATTTGTGGTCCTGGTAACAATGGTGGCGACGGTCTCGTAGCTGCACGACATCTGCATCACTTTGGTTATAAGCCCTTTGTCTGTTACCCAAAGCGTACCCCTAAGCCTCTCTATGCTGGGTTAGTTACTCAGCTTGAAGCACTGTCAATCCCATTCTTGTCTGTGGAAGAACTACCATCAGATCTTTCAAATGACTTTGACGTTGTCATAGATGCAATATTTGGATTCTCATTTCATGGCTCTCCGAGGCCTCCTTTTGATGATTTGATCCAGAGACTTGTATATTTACATAATAATCAAATTGGCCAAAAAAGATCAGTTATAATCTCTGTAGATATTCCCTCTGGGTGGCATGTTGAAGAGGGAGATGTTGATGGTGCAGGCATTAAACCTGATATGTTGGTTTCTTTGACAGCCCCAAAATTAGGTGCAAAGAAGTTTGGTGGTCCTCACCACTTTCTAGGAGGTAGATTTGTCCCACCTGCTATTGCAGAAAAATATAAGCTTATACTTCCATCATATCCCGGAACATCCATGTGTGTTCGAATTGGTAAGCCTCCCCAAATTGATATCTCTGCTCTAAGAGAGAACTATATCTCTCCAGAATTTCTTGAAGAGCAGGTGGAGGCTGACCCTATTAATCAGTTTCACAAATGGTTTGATGATGCATTGGTTGCTGGTTTGAAGGAACCAAATGCTATGGCCTTGTCAACTGTAGGGAAGGATGGAAAACCTTCATCAAGAATGGTACTTCTTAAAGGCTTCGATAACAATGGATTTGTGTGGTACACAAACTATGAAAGTCGAAAGGCACGTGAATTATCTGAAAATCCACGTGCATCACTTCTTTTTTACTGGGACGGTTTAAACCGTCAGGTGCGGGTGGAAGGGCCTGTTCAGAAAGTCTCTGATGAGGAATCAGAACAGTATTTCCATAGCCGCCCTAGAGGAAGTCAGATTGGAGCAATAGTCAGCAAGCAGAGTGCTGTAGTGCCGGGTAGGCATGTTCTTTATCAGGAGTACACAGAGCTGGAAGAAAAATATGCTGATGGAAGTTTGATCCCTAAACCTAAGAACTGGGGAGGATATAGGCTAACACCACAACTTTTTGAGTTTTGGCAAGGACAGAAATCTCGCTTGCATGACAGGTTGCAATATACTCCCCAAGAGATCAATGGACAGCGGCTGTGGAAGGTTGAGCGGTTGGCTCCCTGA 1647 0.4457 MRSLVRKGRSMTCLCLTHSLTQTHNHNHTLLSSSLHNNNNNTNRNPLFQLFSGILRPRIRAFSTNFRSGPTPTASSSSGLPQSMANFDADSVTYLTQRDAAEIDDTLMGPLGFTVDQLMELAGLSVAISISEVYKPSEYSRVLAICGPGNNGGDGLVAARHLHHFGYKPFVCYPKRTPKPLYAGLVTQLEALSIPFLSVEELPSDLSNDFDVVIDAIFGFSFHGSPRPPFDDLIQRLVYLHNNQIGQKRSVIISVDIPSGWHVEEGDVDGAGIKPDMLVSLTAPKLGAKKFGGPHHFLGGRFVPPAIAEKYKLILPSYPGTSMCVRIGKPPQIDISALRENYISPEFLEEQVEADPINQFHKWFDDALVAGLKEPNAMALSTVGKDGKPSSRMVLLKGFDNNGFVWYTNYESRKARELSENPRASLLFYWDGLNRQVRVEGPVQKVSDEESEQYFHSRPRGSQIGAIVSKQSAVVPGRHVLYQEYTELEEKYADGSLIPKPKNWGGYRLTPQLFEFWQGQKSRLHDRLQYTPQEINGQRLWKVERLAP 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0131 548 PANTHER NAD(P)H-HYDRATE EPIMERASE 88 533 - -
Aed10g0131 548 Gene3D - 342 540 IPR012349 -
Aed10g0131 548 Pfam Pyridoxamine 5'-phosphate oxidase 364 450 IPR011576 -
Aed10g0131 548 PANTHER NAD(P)H-HYDRATE EPIMERASE 88 533 IPR032976 -
Aed10g0131 548 Gene3D - 91 332 IPR036652 -
Aed10g0131 548 ProSitePatterns Pyridoxamine 5'-phosphate oxidase signature. 514 527 IPR019740 GO:0016638
Aed10g0131 548 ProSiteProfiles YjeF N-terminal domain profile. 100 315 IPR004443 -
Aed10g0131 548 Hamap NAD(P)H-hydrate epimerase [nnrE]. 96 330 IPR004443 -
Aed10g0131 548 Hamap Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 341 548 IPR000659 GO:0004733|GO:0008615|GO:0010181
Aed10g0131 548 SUPERFAMILY YjeF N-terminal domain-like 94 322 IPR036652 -
Aed10g0131 548 SUPERFAMILY FMN-binding split barrel 347 548 - -
Aed10g0131 548 Pfam YjeF-related protein N-terminus 116 287 IPR004443 -
Aed10g0131 548 TIGRFAM pdxH: pyridoxamine 5'-phosphate oxidase 331 548 IPR000659 GO:0004733|GO:0008615|GO:0010181
Aed10g0131 548 Pfam Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 504 548 IPR019576 -
Aed10g0131 548 TIGRFAM yjeF_nterm: YjeF family N-terminal domain 97 290 IPR004443 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0131 K23998 - gmx:100795497 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0131 10 1001382 1007090 Aed10g0131 10 1001382 1007090 ECH