Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0120 ATGAAATTCTTAGCAATCTACCGTAGCAGACATACCTCTTCTTTGCCATGGATATCTCCTCTCAAATTCGCGGAACCAAAACCAGACCCTCCACCCTCACCGTTCTCCGAACCTACTCGGAAGCGCAAGTTCATCTCTCACGACGCCGCAATAGACTTAATCAAACGCGAGAAGGATCCGCAGCACGCTTTAAAAATATTCAACATGGTATCAGAACAGAAAGGGTTTCAACACAACAACGCTACTTACGCCACCATTCTCGAAAAGCTCGCTCGCTGCAAAAAGTTCCACGCCGTCGACCGTCTCCTCCATCAGATGACGACCTACGAAACCTGCAAGTTCCACGAGGGCATTTTCGTCAACCTCATGAACCATTTCTCCAAATCGGAACTTCACGAAAAGGTTCTCCACGCGTTTCTCTCCATTCAGCCAGTTGTTAGGGAAAAACCCTCCCCCAAAGCCCTCACCACCTGTCTCAACCTTCTGCTTGATTCGAATCGCGTCGATTTGGCGCGAAAATTGCTCTTACATGCCAAACGGGGTTTAACTCATAAGCCGAACGTGTGTGTGTTTAATATCCTTGTGAAGTACCATTGCAAGAATGGGGATCTTGATTCTGCTTTTGTGGTTGTGAAAGAAATGAGAAACTCTGAGTTTTCTCACCCTAATTTAGTTACTTACTCGACCCTTATGGATGGTCTATGTCGAAATGGGAGAGTCAAAGAAGCCTTCCAACTGTTTGAGGAAATGGTTTCGAGGGATCACATTGTGCCTGATCCTCTTACATACAATGTTTTGATCAACGGGTTTTGCCGCGGAGGGAAACCCGACCGTGCTAGAAATGTGATTGATGAGTTGGAAAAGGCAAAAGAGTTATTGGGGCTAATGCTAAGTAGGGGGTTTCGGCCCCACTATGCTACCTCAAATGAATTGTTGGTTTGTCTTTGTAAGGCGGGGATGGTTGATGATGCTGCTCTGGCACTGTTTGGCTTGGTGGAAATGGGGTTCCAGCCAGGACTTGAGTCTTGGGAAGTTTTGATTGGGCTAATCTGCAGAGACAGGAAGTTATTGTATGTGTTTGAGCTGCTTGATGAATTAAACCTTATAGGGGAATTGGATCCAATGACACGAGATGAATTGTGGAGTAAATCTGTCTTAGAATCAAGTAGCACTACCCACCTATCGGCGCGTGACTCTGGTGAAAATCACAAAGAAACTAAGCACACAGAACCAGAAAAACAAACTTCAACAAAGACAAAAACCGCTCTCTTCTTCTACAACATTCAACTAAACCACACCATTCGCATCAACAGAGTCTCCGAAAATATCATGCTCCAAAACAAAACCATGGCATCATCACTCTCAGGCATTTGCTCTTCTTCCCCGGCTCTCAAAAAATTCCCACCAAACCAATCCCCATCGTTGACCGACACTCTCCGCAAAGACCACGTGTCCTTCCCCACCCGCCGCAGCGATCGGACCATCAGCTTCGCGGTGGCCCGGGAGGTTTCCGACGGAGTGGCGTCGGCGGCGGTGAAGAAGGGGCTGGAGAAGGATCCGCGGTCACTGTGGCGGAGATACGTGGATTGGCTGTACCAGCACAAGGAACTTGGGCTCTACTTGGATGTGAGTCGGGTCGGGTTCAGCGACGAGTTCGTGAAGAAAATGGAGCCCCGTTTCGAAGCGGCGTTTGTGGCGATGGAGGAGTTGGAGAAGGGCGCGATCGCGAATCCCGATGAGGGTCGCATGGTGGGACACTATTGGCTGAGGGACCCTAAGCGCGCACCCACCTCGTTCCTCAGGACGCAGATTGAGAACACTCTCGTCGCTGTTTGCAACTTCGCTAACGACGTCGTTAGTAGTAAGATTAAGCCTCCTTCGTCTCCGGAGGGTCGATTTACTCAAATACTGTCTGTGGGAATTGGAGGTTCTGCTCTTGGCCCACAGTTTGTTGCAGAGGCATTGTCTCCTGATAATCCTCCACTCAAGATAAGATTTGTGGACAACACGGATCCTGCTGGAATTGATCATCAGATTGCACAGCTTGGGCCAGAGCTAGCTTCAACGCTTGTGATTGTGATTTCAAAGAGTGGAGGTACTCCAGAGACTAGAAATGGTTTATTGGAAGTGCAGAAGGCATTCCGTGAAGCAGGCTTGGATTTTCCCAAACAGGGTGTTGCTATAACACAAGAAAATTCTTTGTTGGATAACACTGCCAGAATTGAGGGCTGGTTAGCTAGATTTCCGATGTTTGATTGGGTGGGAGGTAGAACATCAGAGATGTCTGCAGTTGGCCTGCTTCCAGCAGCCCTTCAGGGCATTGATATTAGAGAAATGCTTGCTGGTGCATCATTGATGGATGAGGCAAATAGAAGTACTGTGTTAAGGAATAACCCTGCAGCTCTGCTGGCTTTATGTTGGTATTGGGCTACAGATGGTGTAGGATCCAAGGATATGGTTATTCTTCCATACAAGGACAGCCTGCTATTATTCAGTAGATACTTGCAGCAGCTGGTCATGGAATCTCTAGGCAAGGAGTTTGACTTGGATGGTAATCGGGTTAATCAAGGAATTAGTGTCTATGGAAACAAAGGAAGCACAGATCAACATGCCTATATTCAACAATTGAGGGAAGGTGTACACAATTTCTTTGCGACATTCATTGAGGTGCTACGTGATAGACCCCCTGGTCATGATTGGGAACTTGAACCCGGCGTCACATGTGGTGACTACTTGTTTGGTATGCTACAGGGAACAAGGTCGGCTTTGTATGCCAATAACCGAGAGTCCATCACAGTTACTGTACAAGAAGTGACACCAAGAACAGTTGGTGCTCTTGTTGCGCTCTATGAACGAGCAGTAGGAATTTATGCCTCCCTTGTCAACATAAATGCTTATCATCAACCTGGTGTGGAAGCTGGTAAAAAAGCAGCAGGTGAAGTACTGGCACTTCAGAAGCGAGTGTTGGCAGTGCTAAATGAGGCGAGCTGCAAAGAGCCTATTGAGCCATTGACCCTTGAGGAAGTAGCTGACCGTTGCCATGCTCCTGAAGATATTGAAATGATTTACAAGATTATTGCACACATGGCTGCCAATGACAGAGCACTAATTGCCGAAGGCAGCTGTGGTTCACCACGCAGCATCAAGGTTTTCCTTGGGGAATGTAACATCGATGAATTGTATGCATGA 3189 0.4744 MKFLAIYRSRHTSSLPWISPLKFAEPKPDPPPSPFSEPTRKRKFISHDAAIDLIKREKDPQHALKIFNMVSEQKGFQHNNATYATILEKLARCKKFHAVDRLLHQMTTYETCKFHEGIFVNLMNHFSKSELHEKVLHAFLSIQPVVREKPSPKALTTCLNLLLDSNRVDLARKLLLHAKRGLTHKPNVCVFNILVKYHCKNGDLDSAFVVVKEMRNSEFSHPNLVTYSTLMDGLCRNGRVKEAFQLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIDELEKAKELLGLMLSRGFRPHYATSNELLVCLCKAGMVDDAALALFGLVEMGFQPGLESWEVLIGLICRDRKLLYVFELLDELNLIGELDPMTRDELWSKSVLESSSTTHLSARDSGENHKETKHTEPEKQTSTKTKTALFFYNIQLNHTIRINRVSENIMLQNKTMASSLSGICSSSPALKKFPPNQSPSLTDTLRKDHVSFPTRRSDRTISFAVAREVSDGVASAAVKKGLEKDPRSLWRRYVDWLYQHKELGLYLDVSRVGFSDEFVKKMEPRFEAAFVAMEELEKGAIANPDEGRMVGHYWLRDPKRAPTSFLRTQIENTLVAVCNFANDVVSSKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALSPDNPPLKIRFVDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQGIDIREMLAGASLMDEANRSTVLRNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESITVTVQEVTPRTVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPIEPLTLEEVADRCHAPEDIEMIYKIIAHMAANDRALIAEGSCGSPRSIKVFLGECNIDELYA 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0120 1062 MobiDBLite consensus disorder prediction 397 415 - -
Aed10g0120 1062 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 452 1062 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed10g0120 1062 PRINTS Glucose-6-phosphate isomerase signature 636 655 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed10g0120 1062 PRINTS Glucose-6-phosphate isomerase signature 926 944 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed10g0120 1062 PRINTS Glucose-6-phosphate isomerase signature 944 958 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed10g0120 1062 PRINTS Glucose-6-phosphate isomerase signature 748 766 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed10g0120 1062 PRINTS Glucose-6-phosphate isomerase signature 958 971 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed10g0120 1062 PRINTS Glucose-6-phosphate isomerase signature 824 845 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed10g0120 1062 CDD SIS_PGI_1 605 771 IPR035476 -
Aed10g0120 1062 ProSitePatterns Phosphoglucose isomerase signature 2. 958 975 IPR018189 GO:0004347|GO:0006094|GO:0006096
Aed10g0120 1062 Gene3D Tetratricopeptide repeat domain 287 422 IPR011990 GO:0005515
Aed10g0120 1062 Gene3D Tetratricopeptide repeat domain 147 286 IPR011990 GO:0005515
Aed10g0120 1062 Gene3D - 772 967 - -
Aed10g0120 1062 Pfam PPR repeat family 222 272 IPR002885 -
Aed10g0120 1062 Pfam Phosphoglucose isomerase 923 983 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed10g0120 1062 Pfam Phosphoglucose isomerase 566 892 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed10g0120 1062 CDD SIS_PGI_2 817 981 IPR035482 -
Aed10g0120 1062 Pfam PPR repeat 184 215 IPR002885 -
Aed10g0120 1062 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 187 221 IPR002885 -
Aed10g0120 1062 SUPERFAMILY SIS domain 518 985 IPR046348 GO:0097367|GO:1901135
Aed10g0120 1062 Hamap Glucose-6-phosphate isomerase [pgi]. 536 985 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed10g0120 1062 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 494 991 IPR001672 GO:0004347|GO:0006094|GO:0006096
Aed10g0120 1062 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 223 257 IPR002885 -
Aed10g0120 1062 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 452 1062 - -
Aed10g0120 1062 Gene3D - 586 771 - -
Aed10g0120 1062 MobiDBLite consensus disorder prediction 391 417 - -
Aed10g0120 1062 Gene3D Tetratricopeptide repeat domain 33 145 IPR011990 GO:0005515
Aed10g0120 1062 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 259 293 IPR002885 -
Aed10g0120 1062 TIGRFAM PPR: pentatricopeptide repeat domain 225 259 IPR002885 -
Aed10g0120 1062 TIGRFAM PPR: pentatricopeptide repeat domain 262 287 IPR002885 -
Aed10g0120 1062 TIGRFAM PPR: pentatricopeptide repeat domain 190 222 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0120 Aed-Chr10 910676 918033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0120 121 370 Glycosyltransferase AT1G05670 30.677 5.56e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0120 K01810 - gmx:100791285 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0120 10 910676 918033 Aed10g0120 10 910676 918033 ECH