Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0118 ATGAGTCTTAAAGGATTTTTCGAAGGTGGCGTTGCATCCATCGTCGCAGGCTGCACCACCCACCCATTCGACCTCATCAAGGTCCGAATGCAACTCCAAGAGACCCACACTCTCCGCCCCGCGTTTGCCATTCACGCGCCAACCTCAATGCCGCCTCCTCCCTCCGGTCCCATCTCCGTCGGCGTCCGCATCGTCCAGTCGGAGGGCCTCTCCGCCCTCTTCTCCGGCGTCTCCGCCACCGTGCTCCGCCAGACTCTCTACTCCACCACCCGCATGGGCCTCTACGACGTCCTCAAGCGCCGCTGGACCGACCCCGACCAGGGCACCCTGCCCCTCACCCGCAAGATCACGGCGGGCCTCGTCGCCGGCGCCATCGGAGCCGCCGTGGGGAACCCCGCCGACGTGGCGATGGTGCGCATGCAGGCCGACGGCCGCCTCCCGCATGCGGAGCGGCGCAACTACAAGGGCGTGTTCGACGCGATACGGCAAATGAGCAACCAAGAGGGTGTTGCTAGCCTGTGGCGCGGCTCAGCGCTTACGGTGAACCGCGCTATGATCGTAACGGCTTCCCAGCTGGCCTCGTACGACCAGTTTAAGGAAACTATTCTAGGACGCGGTTGGATGGAGGACGGGCTTGGGACCCACGTGGCAGCGAGTTTTGCGGCGGGTTTCGTGGCCTCGGTTGCGTCGAACCCAATAGATGTTATAAAGACTAGAGTTATGAACATGAAGGCTGAGGCTTACAATGGAGCATTGGATTGTGCTCTCAAAACTGTTAGGACCGAAGGACCTCTTGCCCTCTATAAGGGTTTCATCCCTACGATTTCAAGACAGGGTCCTTTCACCGTTGTCCTCTTTGTCACCCTTGAACAAGTCAGGAAGCTGCTCAAGGACTTTTCAATTTAA 906 0.5971 MSLKGFFEGGVASIVAGCTTHPFDLIKVRMQLQETHTLRPAFAIHAPTSMPPPPSGPISVGVRIVQSEGLSALFSGVSATVLRQTLYSTTRMGLYDVLKRRWTDPDQGTLPLTRKITAGLVAGAIGAAVGNPADVAMVRMQADGRLPHAERRNYKGVFDAIRQMSNQEGVASLWRGSALTVNRAMIVTASQLASYDQFKETILGRGWMEDGLGTHVAASFAAGFVASVASNPIDVIKTRVMNMKAEAYNGALDCALKTVRTEGPLALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKDFSI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0118 301 Gene3D Mitochondrial carrier domain 4 299 IPR023395 -
Aed10g0118 301 Pfam Mitochondrial carrier protein 212 298 IPR018108 -
Aed10g0118 301 Pfam Mitochondrial carrier protein 110 203 IPR018108 -
Aed10g0118 301 Pfam Mitochondrial carrier protein 4 102 IPR018108 -
Aed10g0118 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 295 IPR018108 -
Aed10g0118 301 SUPERFAMILY Mitochondrial carrier 3 292 IPR023395 -
Aed10g0118 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 101 IPR018108 -
Aed10g0118 301 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 1 299 - -
Aed10g0118 301 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 5-LIKE 1 299 - -
Aed10g0118 301 PRINTS Mitochondrial brown fat uncoupling protein signature 95 107 IPR002030 GO:0006839|GO:0031966
Aed10g0118 301 PRINTS Mitochondrial brown fat uncoupling protein signature 284 301 IPR002030 GO:0006839|GO:0031966
Aed10g0118 301 PRINTS Mitochondrial brown fat uncoupling protein signature 164 181 IPR002030 GO:0006839|GO:0031966
Aed10g0118 301 PRINTS Mitochondrial brown fat uncoupling protein signature 207 225 IPR002030 GO:0006839|GO:0031966
Aed10g0118 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 110 201 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0118 Aed-Chr10 888265 889170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0118 1 298 Miscellaneous Gene Families AT5G09470 60.180 1.32e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0118 K15104 - gmx:100790234 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0118 10 888265 889170 Aed10g0118 10 888265 889170 ECH