Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0104 ATGTCAAAGGAGAAATTCTTTTTGATCACACTTACTTGCAGCTTCGCGTGGTACGTGGTCCCTGGCTACCTATTTACAACGTTGTCAATTATTTCGTGGGTTTGTTGGATATTTCCCCGTTCAGTAACTGCACAGCAGATTGGGTCCGGGGGAAATGGGCTTGGTCTGGGTTCCTTTTCCCTTGACTGGACCACCATTGCTTCATTCCTTGGCAATCCACTCGTTTCTCCTTTCTTTGCAACAGCAAACATCATGGTTGGTTACATCTTATTGATCTACCTCATCATACCTGTCGCATATTGGGGTCTTAATATCTACAATGCCAAGAACTTCCCCATTTACTCTTCTAGTCTCTTCACTGCCAATGGTGACAAGTACAATGTGACGGCCATTGTGAATAACAAGTTTGAGATAGATATGCTGGAATACGAGAAACAAGGTCGAGTCAACTTGAGTGCGTTCTTTGCTATTAGTTATGGCATTGGTTTTGCTGCCATTGCCTCTTCCCTCACTCATGTGGCCATTTTTAATGGGAGGGAGATATATGAACAATTCCGATCCTCCCGGTCTGGGAAGGAAGACATTCACACAAGATTGATGAGGAAGTACAAGCAAATACCTAGTTGGTGGTTTCATGTGACGCTTTTGGTTTCTTTTGCACTTGCACTTTTACTGTGCATTGTAATGAAAGAACAGATACAAATGCCATGGTGGGGTCTCTTCTTTGCAGCTGGGATTGCACTTACTTTTACTCTCCCCGTTAGCATCATAACGGCCACCACTAATCAGACTCCAGGTTTGAATATCATTACTGAGTACATCATGGGTGTGATTTTACCTGGCAAACCAATAGCAAACGTTTGCTTCAAGACATATGGGTACATAAGTATGTCCCAGGCTGTTTCCTTTCTATCTGATTTCAAGCTAGGAGTTTACATGAAGATTCCACCACGGTCCATGTTCATTGTTCAGCTTGTAGGGACGCTGATAGCAGGAACCGTGGACGTTGGTGTGGCATGGTGGTTGCTGGGTTCAGTAGAGAATATATGCAACCAAGATATACTTCCCCCCGACAGTCCATGGACTTGCCCGAATGACAAAGTTTTCTTTGATGCATCTGTGATCTGGGGTTTGGTTGGCCCAAAGAGAATTTTCGGTACTCTTGGGAATTACCCAAAACTCAATTGGTTCTTCTTAACAGGAGCATTGGGACCACTTGTTATATGGCTGCTCCAGAAAGCCTTTCCCAAACAACGTTGGATATCATTAATACACCTTCCTGTACTTCTTGGAGCAACTGCGAGCATGCCACCAGCTAGCACAGTGAACTTCAATACATGGATTACCGTTGGCACAATCTTTAACTACTTTGTGTTCAAATACCGTAAGAACTGGTGGCAGCGGTACAATTATGTGCTAGCGGCAGCTTTGGACGCTGGATTGGCTTTCATGACGGTTCTTCTATACTTTGCAGTTAACTTGGAGCAAAAAAACATTGAATGGTGGGGAAATAATGATGAACAATGCCCACTTGCCAGTTGTCCAACAGCGAAAGAGATTAAAGAGGTTAATTGTGCTGGAGTCCAAGCTCTGGGTACAAATAATGTTACCACTCATACCCGGTGA 1626 0.4385 MSKEKFFLITLTCSFAWYVVPGYLFTTLSIISWVCWIFPRSVTAQQIGSGGNGLGLGSFSLDWTTIASFLGNPLVSPFFATANIMVGYILLIYLIIPVAYWGLNIYNAKNFPIYSSSLFTANGDKYNVTAIVNNKFEIDMLEYEKQGRVNLSAFFAISYGIGFAAIASSLTHVAIFNGREIYEQFRSSRSGKEDIHTRLMRKYKQIPSWWFHVTLLVSFALALLLCIVMKEQIQMPWWGLFFAAGIALTFTLPVSIITATTNQTPGLNIITEYIMGVILPGKPIANVCFKTYGYISMSQAVSFLSDFKLGVYMKIPPRSMFIVQLVGTLIAGTVDVGVAWWLLGSVENICNQDILPPDSPWTCPNDKVFFDASVIWGLVGPKRIFGTLGNYPKLNWFFLTGALGPLVIWLLQKAFPKQRWISLIHLPVLLGATASMPPASTVNFNTWITVGTIFNYFVFKYRKNWWQRYNYVLAAALDAGLAFMTVLLYFAVNLEQKNIEWWGNNDEQCPLASCPTAKEIKEVNCAGVQALGTNNVTTHTR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0104 541 PANTHER ISP4 LIKE PROTEIN 1 526 IPR004648 GO:0055085
Aed10g0104 541 Pfam OPT oligopeptide transporter protein 1 492 IPR004813 GO:0035673
Aed10g0104 541 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 1 497 IPR004648 GO:0055085
Aed10g0104 541 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 16 494 IPR004813 GO:0035673
Aed10g0104 541 PANTHER OLIGOPEPTIDE TRANSPORTER 2 1 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0104 Aed-Chr10 804776 807178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0104 1 525 Organic Solute Cotransporters AT1G09930 69.962 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0104 - - gmx:100785973 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0104 10 804776 807178 Aed10g0104 10 804776 807178 ECH