Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0095 ATGGCCGTTTCAACCTCTTTCTCCGGTGCCAAATTGGAGGCTCTATTCCTCAAATGCTCTTCTTCTTCTTCTTCCTCATCGTCGCCTCCTTCGAGGGCATCATTCACCACTTTTCATAACAGAAGAACCCTCATTCAGAGAGGGATCATTCGCTGCGATGCTCAGGCCTCCTCTGATGCATCATCATCATCGGTTGCCTCCGCTCTTGAGCAGCTCAAGTCTTCTGCAGCTGATAGGTATACAAAGGAAAGGAGCAGCATTATTGTCATTGGGCTTAGTGTGCACACTGCACCTGTGGAAATGCGTGAAAAACTTGCCATTCCAGAAGCAGAATGGCCTCGAGCTATTGCAGAGCTGTGTAGTCTTAATCATATTGAAGAAGCAGCTGTTCTGAGCACCTGCAACCGAATGGAGATATATGTTCTTGCTATGTCCCAACATCGTGGTGTCAAAGAAGTCATGGAATGGATGTCAAAAGTAAGTGTGGAGATCATTTCACAGATGACAAGTTCTGTCCCTGTTTCAGAGCTTAGCCAGCACCGGTTTTTACTTTACAACAATGATGCCACACAGCATCTTTTTGAAGTATCAGCAGGTCTTGACTCTCTTGTTTTGGGGGAAGGTCAAATCCTTGCTCAGGTTAAGCAAGTTGTCAAAGTTGGACAAGGAGTTAATGGCTTTGGGAGGAACATTAGTGGGCTATTCAAGCATGCAATTACTGTCGGGAAAAGGGTTAGAACTGAGACTAATATTGCTTCTGGGGCAGTTTCTGTGAGCTCAGCTGCCGTTGAATTGGCCTATATGAAGCTACCTGAAGCCTCACATGATAATGCAAGGATGTTGGTTGTTGGTGCTGGCAAGATGGGAAAGCTTGTGATCAAACATTTGGTGGCAAAAGGTTGCAAAAAGATGGTGGTTGTCAATAGAACTGAGGAGAGAGTTGCTGCAATACGTGAAGAGCTGAAGGATATTGAGATTATCTACAAACCCCTTTCAGAAATGCTCACCTGTGCCAGTGAAGCAGATGTAGTTTTCACCAGTACTGCATCAGAAACCCCATTATTCTTGAAAGATCATGTCAAGGACCTTCCTCCTGCAAGCCAGGAAGTTGGAGGCCGTCGCTTTTTCGTTGATATCTCTGTTCCCCGGAATGTGGGTTCATTTGTCTCTGACCTTGAGTCTGTGCGAGTTTACAATGTCGATGACCTTAAAGAGGTTGTGGCTGCCAATAAAGAGGATCGCCTTAGAAAAGCAATGGAAGCACAGACAATCATTGCTGAAGAATCTAAGCAATTCGGAGCTTGGAGAGACTCACTGGAAACTGTTCCTACAATTAAGAAATTGAGGGCTTATGCTGAAAGAATCAGGCTGGCTGAGCTTGATAAATGCTTAGGTAAGATGGGTGATGATATACCAAAGAAAACACGGCGAGCTGTGGATGATCTGAGTCGAGGTATAGTGAATAAGTTGCTTCATGGTCCAATGCAACATTTAAGGTGTGATGGGAATGACAGCCGGACTCTTAGTGAGACACTGGAGAACATGCATGCTTTGAATAGGATGTTCAACCTTGACACTGAAGCATCTGTTTTGGAGCAGAAGATTCGAGCAAAGGTAGAACAAAACCAGAAATGA 1635 0.4477 MAVSTSFSGAKLEALFLKCSSSSSSSSSPPSRASFTTFHNRRTLIQRGIIRCDAQASSDASSSSVASALEQLKSSAADRYTKERSSIIVIGLSVHTAPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCNRMEIYVLAMSQHRGVKEVMEWMSKVSVEIISQMTSSVPVSELSQHRFLLYNNDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIASGAVSVSSAAVELAYMKLPEASHDNARMLVVGAGKMGKLVIKHLVAKGCKKMVVVNRTEERVAAIREELKDIEIIYKPLSEMLTCASEADVVFTSTASETPLFLKDHVKDLPPASQEVGGRRFFVDISVPRNVGSFVSDLESVRVYNVDDLKEVVAANKEDRLRKAMEAQTIIAEESKQFGAWRDSLETVPTIKKLRAYAERIRLAELDKCLGKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGNDSRTLSETLENMHALNRMFNLDTEASVLEQKIRAKVEQNQK 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0095 544 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 1 544 - -
Aed10g0095 544 Hamap Glutamyl-tRNA reductase [hemA]. 86 522 IPR000343 GO:0008883|GO:0033014|GO:0050661
Aed10g0095 544 PANTHER GLUTAMYL-TRNA REDUCTASE 1 544 - -
Aed10g0095 544 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 420 524 IPR015896 GO:0008883|GO:0033014|GO:0050661
Aed10g0095 544 Coils Coil 307 327 - -
Aed10g0095 544 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 418 524 IPR036453 GO:0008883|GO:0033014|GO:0050661
Aed10g0095 544 Gene3D - 85 254 IPR036343 GO:0008883|GO:0033014|GO:0050661
Aed10g0095 544 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 90 249 IPR015895 GO:0008883|GO:0033014|GO:0050661
Aed10g0095 544 ProSitePatterns Glutamyl-tRNA reductase signature. 192 215 IPR018214 GO:0008883
Aed10g0095 544 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 254 414 IPR036291 -
Aed10g0095 544 CDD NAD_bind_Glutamyl_tRNA_reduct 87 418 - -
Aed10g0095 544 Gene3D - 255 407 - -
Aed10g0095 544 TIGRFAM hemA: glutamyl-tRNA reductase 87 505 IPR000343 GO:0008883|GO:0033014|GO:0050661
Aed10g0095 544 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 86 251 IPR036343 GO:0008883|GO:0033014|GO:0050661
Aed10g0095 544 Pfam Shikimate / quinate 5-dehydrogenase 265 406 IPR006151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0095 Aed-Chr10 732564 735264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0095 K02492 - gmx:100782247 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0095 10 732564 735264 Aed10g0095 10 732564 735264 ECH