Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0091 ATGGCCTCGTTTCGCCGGACTCTGTCGCCGGCGTATCCCGATCGCCAGTACCTAAACGGTTCGTTTTCGGTTTCCTCTCCGTCGCACAAGCTCCCGTCCGCGAACGCAAAGTACTCGTCGCCGTTGCCGGCGCTTGCGGCGGCGTTCCGTCGGTTCGCCGGCGGAGTGTTCACGCGCCGGCATGGTCGGAAAGGTCAGTGGAGGCGCGTGGCGTTCAGGTGCGTGCTCTGCTTCTTCGTAGGGTTCTTGTTAGGCATGTTCCCGTTCGGCCACGTGTCGGAGGATGTTCGGTCGCAGGAAATCTCGTTCGAGATGAAGCCGCCGCTGCCGCGCGTTGCGAACAACGCGCAGCAGCTGCTTCGCGAAGATCGCGTGCTGCGGAATCGCGTGGAGGAGGGTTTCGTGATCGATCCGGTGAGTCTGAGCGCGGAGAGGGAGAGGGAGCAGAGCGAGAGGTTCGATTTGGTGCCGAGGAAGCCGCTGATTGTGGTGACGCCGACGTACGAGCGCGCGTTTCAGGCGTATTTCCTGAACCGGCTGGGGCAGGTGCTGCGGCTGGTGCCGCCGCCGGTGGTGTGGATTGTGGTGGAGATGAACGCGGCGTCGATGGAGACGGCGGAGGTGCTGAGGAAGACGGGCGTGATGTATAGGCATTTGGTGTGCAATAAGAATTTGACGGATGTGAAGGACAGAGGGGTTCATCAGAGGAACACAGCGTTGGAACACATTGAGCGTCATAAGCTCGATGGAATTGTTTACTTTGCGGATGATGATAATGTGTATTCTCTCGAGTTGTTTGACGCCTTGAGAGATATCAGCCGCTTTGGCACTTGGCCTGTTGCCATGCTTGCGCCAAGCAAGAACAAGGCCATTTTGGAGGGTCCTGTATGCAATGCAAGCCAAGTGATTGGATGGCATACAAATGAGAAAAGTAAAAGACTTCGAAGATTTCATGTTGATATGTCTGGATTTGCATTCAACAGCTCAATCTTGTGGGATCCAAAACGATGGCGACGCCCTTCTTCAAATCCCATACGGCAGTTAGACACAGTGAAGGAGGGGTTTCAAGAGACCACCTTTATAGAACAATTGGTGGAAGATGAAAGTCAAATGGAAGGTTCACCTTCTGGTTGTTCAAAAATATTGAATTGGCATCTCCATTTGGCTGCTCATAACATAGTTTACCCAAAAGGTTGGGTGCTTCAGAAAAACCTAGATGCTATCATACCTGTCAAGTAA 1239 0.5383 MASFRRTLSPAYPDRQYLNGSFSVSSPSHKLPSANAKYSSPLPALAAAFRRFAGGVFTRRHGRKGQWRRVAFRCVLCFFVGFLLGMFPFGHVSEDVRSQEISFEMKPPLPRVANNAQQLLREDRVLRNRVEEGFVIDPVSLSAEREREQSERFDLVPRKPLIVVTPTYERAFQAYFLNRLGQVLRLVPPPVVWIVVEMNAASMETAEVLRKTGVMYRHLVCNKNLTDVKDRGVHQRNTALEHIERHKLDGIVYFADDDNVYSLELFDALRDISRFGTWPVAMLAPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSSILWDPKRWRRPSSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGSPSGCSKILNWHLHLAAHNIVYPKGWVLQKNLDAIIPVK 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0091 412 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 160 406 IPR029044 -
Aed10g0091 412 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 409 IPR005027 GO:0015018|GO:0016020
Aed10g0091 412 CDD GlcAT-I 159 390 IPR005027 GO:0015018|GO:0016020
Aed10g0091 412 Pfam Glycosyltransferase family 43 180 388 IPR005027 GO:0015018|GO:0016020
Aed10g0091 412 SUPERFAMILY Nucleotide-diphospho-sugar transferases 160 405 IPR029044 -
Aed10g0091 412 PANTHER GLYCOSYLTRANSFERASES 1 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0091 Aed-Chr10 682455 687374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0091 1 412 Glycosyltransferase AT1G27600 61.893 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0091 K20869 - gmx:100809892 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0091 10 682455 687374 Aed10g0091 10 682455 687374 ECH