Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0090 ATGTGTAATCCAAAACCATCGTCGTCATCATCCCCATTTCTGTGTCCCACAAAAAACCACATCATAACCCCCGACCCCAAACTCATGAATCACCCTCCTCCTCTTGATGATGATCAACTCCAGAGATGGCCAACTCCAAATGAGGTGATGGGAGAAATGAAGGCCATAGGGAAGATATCAGGGCCAACAGCACTGACCGGTTTAATCCTATATTCGAGAGCGATGATCTCGATGCTCTTCCTCGGCTACCTCGGCGAGATGGAGCTTGCGGGAGGCTCCCTCTCCATCGGGTTTGCCAACATAACCGGCTACTCCGTCATATCCGGCCTCGCCATGGGAATGGAACCAATCTGCGGCCAAGCCTACGGCGCCAAACAGTTGAAAACTCTTGGCTTAACACTCCAGAGAACCGTTCTCCTCCTCCTCTCAACCTCCCTTCCTATTTCCCTAACGTGGCTCAACATGAAGAACATCCTCTTATGGTGCGGCCAAGACCAGCAAATCTCCTCCACCGCTCAGACCTTCATCCTCTTCTCCATCCCGGACCTCTTCCTCCTCTCCCTCCTCCACCCTCTCAGAATCTACCTCAGAACACAGACCATCACTTTACCCCTAACATACTGCTCCGCTATCTCCGTCCTCCTCCACGTCCCCCTCAACTTCCTTCTAGTTGTTCACTTCAAAATGGGAGTGTCCGGCGTCGCTATAGCAATGGTCTTGACCAACCTCAACCTCGTCCTCTTCCTCTCCTCCTTCATTTACTTCTCGGGAGTCTACAAAGATTCATGGGTCCCACCCAGCACCGACTGTCTCAGGGGATGGTCTTCGTTGCTCGCACTTGCTGTTCCAACCTGCGTTTCGGTCTGCCTCGAATGGTGGTGGTACGAACTCATGATCATCCTCTGCGGACTCCTTCTCAACCCAAGAGCCACCATTGCCTCCATGGGAATCCTCATCCAAACAACCTCCTTGGTCTACGTCTTCCCTTCTTCCCTCAGCCTCGCCGTTTCCACCCGAGTCGGAAACGAGTTGGGCGCCAACCGCCCCGCCAAAGCTCGCATTTCAATGATAGTCTCACTCGCCTGTGCTTTTGCTCTAGGCGTCACCGCCATGATCTTCACCACCCTCATGAGACACCGCTGGGGGAGATTCTTCACCTCCGACAAAGAAATCCTCCAGCTCACGTCCATTGCGCTCCCCATTGTCGGCCTCTGCGAGCTCGGTAACTGCCCGCAGACCGCGGGCTGCGGCGTACTCAGAGGCAGCGCCAGGCCCACCGTGGGTGCGAATATCAACTTGGGCTCGTTTTATTTGGTTGGTATGCCTGTCGCGGTTCTTCTCGGCTTTGTTGGGAAAATGGGCTTTCCTGGCCTCTGGCTTGGCTTGCTTGCGGCCCAAGCCTCTTGCGCTGCCCTCATGATATTCGTTCTCTGCACCACTGACTGGAATGCGCAGGTGCAAAGGGCCAACCAGCTTACTAATGCTAATTACACTTCTCCTCCTACTCCCACCAAATTACCTAGGTTCACGCCAACAACAACAGATCTTGTTTGCCTTCGAGAGATTGCTGTCACGGAAACTACTACTACTACACCTTCTCTTGAAACAGACCCTCTCATTATACACACTATAAATAATTATTAA 1644 0.5292 MCNPKPSSSSSPFLCPTKNHIITPDPKLMNHPPPLDDDQLQRWPTPNEVMGEMKAIGKISGPTALTGLILYSRAMISMLFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQLKTLGLTLQRTVLLLLSTSLPISLTWLNMKNILLWCGQDQQISSTAQTFILFSIPDLFLLSLLHPLRIYLRTQTITLPLTYCSAISVLLHVPLNFLLVVHFKMGVSGVAIAMVLTNLNLVLFLSSFIYFSGVYKDSWVPPSTDCLRGWSSLLALAVPTCVSVCLEWWWYELMIILCGLLLNPRATIASMGILIQTTSLVYVFPSSLSLAVSTRVGNELGANRPAKARISMIVSLACAFALGVTAMIFTTLMRHRWGRFFTSDKEILQLTSIALPIVGLCELGNCPQTAGCGVLRGSARPTVGANINLGSFYLVGMPVAVLLGFVGKMGFPGLWLGLLAAQASCAALMIFVLCTTDWNAQVQRANQLTNANYTSPPTPTKLPRFTPTTTDLVCLREIAVTETTTTTPSLETDPLIIHTINNY 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0090 547 TIGRFAM matE: MATE efflux family protein 64 459 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed10g0090 547 Pfam MatE 62 222 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed10g0090 547 Pfam MatE 283 446 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed10g0090 547 PANTHER PROTEIN DETOXIFICATION 31 506 - -
Aed10g0090 547 CDD MATE_eukaryotic 52 488 IPR045069 GO:0042910|GO:1990961
Aed10g0090 547 PANTHER MULTIDRUG RESISTANCE PROTEIN 31 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0090 Aed-Chr10 664995 667634 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0090 K03327 - gmx:100788339 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0090 10 664995 667634 Aed10g0090 10 664995 667634 ECH