Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0087 ATGAACCACCCCTTCATCGCCCTCTTCGCCACCATACTCATCATCATCAATACCAGAGTTTCCCTCTGCTCACAGTCACAGTCACAGTCACAGTCACAGTTTTTCTCTCTCGCGAAGGAGACTCTCTCGGGGAAGGACCCCATGATCAACTGGGTCGACGACGCTGCAGCCGTGTGCGCCTTCCCCGGAGTTACCTGCAACACCAAAGGTGACGTCATCGGCCTCGACCTCTCAGGTTGGTCCTCACTCTCCGGAAAGTTCCCACCAGATATATGCTCCTACCTCCCACACTTACGTTCTCTTCACCTCGGCCGCACAAAGTTGAAGTTCCCAATAGACACCACAATCCTCAACTGTTCCCACTTGGAAGAGCTTAACCTGAATCACATGTCCCTAACTGGCACCCTCCCAGATTTCTCTTCCTTAAAATCCCTCAGGATTCTCGACTTGTCCTATAATTCCTTCACCGGGCACTTCCCCATGTCGGTGTTCAACCTCACCAACCTCGAGGAGCTTAACTTCAACGAAAATGGTGGCTTCAACCTGTGGCAGCTACCATCAGGCATCGACAGGTTAAAAAAACTGAAGGTCGTGGTTCTCACAACTTGCATGGTGCATGGCCGAATCCCTGCCTCCATAGGGAACATAACCTCCCTCACCGATCTTGAACTCAGTGGGAATTTCCTCACTGGACAAATTCCCAAAGAGCTTGGTCAGTTGAAGAATCTGCAACAACTCGAGCTTTACTACAACTATCACCTCGTTGGGAACATTCCAGAGGAGCTGGGGAACCTGACGGAGCTCGTGGATTTGGACATGTCGGTGAACAAGTTCAGTGGAAGCATCCCTGCTTCGGTGTGTAGGCTTCCAAAGCTTCAGGTTTTGCAGCTCTACAACAACAGCCTGACCGGAGAAATCCCAGGTGCGATTGAAAACTCAAGAGCTTTGAGAATATTGTCTCTCTACGACAATTCCCTCGTGGGACAGGTTCCCACGAAGCTGGGACAGTTCTCCGGAATGGTGGTTCTCGATTTGTCCGAGAACAAGTTGTCTGGTCCGCTTCCAACCGAGGTCTGCAAGGGAGGTACTCTCGAGTACTTTCTCGTTCTCGACAACATGTTTTCCGGTGAGATTCCTCAGAGCTATTCCAACTGCATGATGCTGTTGAGGTTTAGAGTCAGTAACAACCGTTTGGAGGGGTCCGTTCCCGCGGGACTCCTCGCTTTGCCGCACGTGTCAATCATTGATTTGAGTAGCAATAACTTCACCGGTCCTATTCCCGATATTAACGGGAATTCCAGAAACCTCTCCGAACTGTTCCTTCAAAGGAACAAGATTTCGGGTGTCATAAACCCCACTATATCCCGGGCTATTAACTTGGTCAAGATTGATTTCAGCTATAACTTTTTGTCTGGTCCAATCCCTTCCGAAATTGGCAACCTTAGAAAGCTTAACTTGCTTATGTTGCAAGTGAACAAGCTGAATTCTTCAATCCCCGGTTCACTCTCTTCATTGGAGTCTCTCAACCTTCTTGATCTCTCTAACAATCTTTTAACCGGGAACATCCCTGAAAGCCTCTCTGTGCTGCTACCAAACTCGATTAACTTCTCACACAACCTTCTTTCGGGTCCAATTCCTCCAAAACTGATCAAAGGGGGTTTGGTGGAAAGCTTTGCTGGGAATCCTGGATTGTGTGTTTTACCTGTGTATGCTAATTCTTCTGATCAAAAGTTCCCCGTATGTGCAAGTGCCTACTACAAGAGTAAGAGGATAAACACAATCTGGATAGCTGGGGTGTCAGTGGTTTTAATCTTCATTGGCTCTGCCTTGTTTCTCAAACGTAGGTGCAGCAAAGACACTGCTGCAGTGGAACACGAGGACACGCTGTCTTCTTCGTACTTCTCTTATGATGTTAAGAGCTTCCACAAGGTCTCTTTCGACCAGAGGGAGATAATTGAGTCCTTGGTAGACAAGAACATAATGGGGCATGGAGGGTCTGGGACAGTGTACAAGATTGAGTTGAAAAGTGGTGATATTGTTGCAGTGAAGAGGCTGTGGAGTCACGCGTCCAAGGATTCTGCTCCGGAGGATCGGTTATTTGTGGACAAGGCGTTGAAAGCAGAGAATTTGCATATTCATCAAGGGCCACTACCAAGTGCGATGTGTACAGTTATGGGGTGA 2181 0.4833 MNHPFIALFATILIIINTRVSLCSQSQSQSQSQFFSLAKETLSGKDPMINWVDDAAAVCAFPGVTCNTKGDVIGLDLSGWSSLSGKFPPDICSYLPHLRSLHLGRTKLKFPIDTTILNCSHLEELNLNHMSLTGTLPDFSSLKSLRILDLSYNSFTGHFPMSVFNLTNLEELNFNENGGFNLWQLPSGIDRLKKLKVVVLTTCMVHGRIPASIGNITSLTDLELSGNFLTGQIPKELGQLKNLQQLELYYNYHLVGNIPEELGNLTELVDLDMSVNKFSGSIPASVCRLPKLQVLQLYNNSLTGEIPGAIENSRALRILSLYDNSLVGQVPTKLGQFSGMVVLDLSENKLSGPLPTEVCKGGTLEYFLVLDNMFSGEIPQSYSNCMMLLRFRVSNNRLEGSVPAGLLALPHVSIIDLSSNNFTGPIPDINGNSRNLSELFLQRNKISGVINPTISRAINLVKIDFSYNFLSGPIPSEIGNLRKLNLLMLQVNKLNSSIPGSLSSLESLNLLDLSNNLLTGNIPESLSVLLPNSINFSHNLLSGPIPPKLIKGGLVESFAGNPGLCVLPVYANSSDQKFPVCASAYYKSKRINTIWIAGVSVVLIFIGSALFLKRRCSKDTAAVEHEDTLSSSYFSYDVKSFHKVSFDQREIIESLVDKNIMGHGGSGTVYKIELKSGDIVAVKRLWSHASKDSAPEDRLFVDKALKAENLHIHQGPLPSAMCTVMG 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0087 726 SUPERFAMILY Protein kinase-like (PK-like) 640 691 IPR011009 -
Aed10g0087 726 Gene3D Ribonuclease Inhibitor 182 256 IPR032675 -
Aed10g0087 726 SMART LRR_typ_2 289 313 IPR003591 -
Aed10g0087 726 SMART LRR_typ_2 505 529 IPR003591 -
Aed10g0087 726 SMART LRR_typ_2 481 504 IPR003591 -
Aed10g0087 726 SMART LRR_typ_2 166 192 IPR003591 -
Aed10g0087 726 SMART LRR_typ_2 95 119 IPR003591 -
Aed10g0087 726 SMART LRR_typ_2 216 240 IPR003591 -
Aed10g0087 726 SMART LRR_typ_2 337 361 IPR003591 -
Aed10g0087 726 SUPERFAMILY L domain-like 75 374 - -
Aed10g0087 726 Pfam Leucine rich repeat 96 154 IPR001611 GO:0005515
Aed10g0087 726 SUPERFAMILY RNI-like 256 590 - -
Aed10g0087 726 Gene3D Phosphorylase Kinase; domain 1 629 711 - -
Aed10g0087 726 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 708 - -
Aed10g0087 726 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR1 7 708 - -
Aed10g0087 726 Gene3D Ribonuclease Inhibitor 29 181 IPR032675 -
Aed10g0087 726 Gene3D Ribonuclease Inhibitor 257 576 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0087 Aed-Chr10 635104 639188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0087 28 708 Receptor kinase-like Gene Family AT5G49660 60.496 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0087 - - gmx:100785822 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0087 10 635104 639188 Aed10g0087 10 635104 639188 ECH