Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0080 ATGAATAATCCTGATCAGTTCCAGAAGAATAGCATGTTCATAGAAACTCCTGAAGATGATGGCAAAAACTTCGACGATGATGGACGAGCCAAAAGAACTGGTACATGGATAACCGCGAGTGCTCATATCATAACGGCAGTGATAGGGTCAGGAGTGTTGTCACTTGCATGGGCAATAGCACAAATGGGTTGGGTGGCTGGCCCTGCGGTTCTCTTCGCCTTCTCTTTCATCACTTACTTCACTTCAACCCTTCTTGCCGACTGTTACCGTTCACCTGACCCTGTTCATGGCAAGCGAAACTACACCTATTCCGATGTTGTCAGATCCGTCCTAGGAGGGAGGAAATTCCAGCTCTGTGGATTAGCTCAGTACATAAATCTTGTCGGTGTAACCATCGGTTACACGATAACGGCTTCAATTAGTATGGTGGCGGTGAAGAGGTCGAACTGTTTTCACAAACATGATCATCATGACAAGTGCTACACGTCAAACAACCCATTCATGATCCTCTTTGCCTGCATCCAAATCGTGCTTAGCCAGATACCGAATTTCTCTAAGCTATGGTGGCTCTCAATTGTTGCAGCGGTTATGTCTTTTGCTTATTCTTCCATTGGTCTCGGCCTCTCCGTGGCTAAAGTCGCAGGTGGTGATGGAGAACATGTACGGACGAGCTTAACGGGGGTGCAAGTTGGGGTGGACGTTACGGGATCGGAGAAGGTGTGGAGGACGTTTCAAGCTATTGGTGACATTGCATTCGCTTACGCTTATTCTAACGTCCTCATTGAGATACAGCCCTTTTGGCTAATAGACTTTGCAAACATCTGCATAGCCGTGCACTTGGTTGGAGCATATCAGGTTTTCTGTCAACCCATATTTGGGTTCGTAGAGAAATGGGGTAAGGAAAGGTGGCCCAATAGCCAATTTGTGAATGGAGAACACTCTTTGAAGTTTCCACTATGTGGATCCTACCATGTGAACTTCTTCAGGGTTGTGTGGAGATCATCATATGTCATCATCACTGCTTTGATAGCTATGATGTTTCCATTCTTCAATGACTTCCTAGGCCTGATTGGTTCACTGTCCTTTTGGCCATTAACCGTTTACTTCCCCATAGAGATGTACATCAAGCAGTCAAAGATGCAAAGGTTTTCCTTCACTTGGACATGGCTCAAGATATTGAGCTGGGCTTGCTTGATCGTTTCTATTATCTCAGCTGCTGGCTCCATCCAAGGCCTCTCTCAAGATCTCAAGAAATATCAGCCCTTCAAAGCCCAGCAATAA 1281 0.4582 MNNPDQFQKNSMFIETPEDDGKNFDDDGRAKRTGTWITASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLFAFSFITYFTSTLLADCYRSPDPVHGKRNYTYSDVVRSVLGGRKFQLCGLAQYINLVGVTIGYTITASISMVAVKRSNCFHKHDHHDKCYTSNNPFMILFACIQIVLSQIPNFSKLWWLSIVAAVMSFAYSSIGLGLSVAKVAGGDGEHVRTSLTGVQVGVDVTGSEKVWRTFQAIGDIAFAYAYSNVLIEIQPFWLIDFANICIAVHLVGAYQVFCQPIFGFVEKWGKERWPNSQFVNGEHSLKFPLCGSYHVNFFRVVWRSSYVIITALIAMMFPFFNDFLGLIGSLSFWPLTVYFPIEMYIKQSKMQRFSFTWTWLKILSWACLIVSIISAAGSIQGLSQDLKKYQPFKAQQ 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0080 426 MobiDBLite consensus disorder prediction 1 27 - -
Aed10g0080 426 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 264 419 - -
Aed10g0080 426 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 15 264 - -
Aed10g0080 426 Pfam Transmembrane amino acid transporter protein 267 412 IPR013057 -
Aed10g0080 426 Pfam Transmembrane amino acid transporter protein 32 264 IPR013057 -
Aed10g0080 426 PANTHER OS05G0424000 PROTEIN-RELATED 264 419 - -
Aed10g0080 426 PANTHER OS05G0424000 PROTEIN-RELATED 15 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0080 Aed-Chr10 590984 596206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0080 8 424 Organic Solute Cotransporters AT5G49630 62.004 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0080 K24917 - gmx:100806335 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0080 10 590984 596206 Aed10g0080 10 590984 596206 ECH