Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0066 ATGTCCAAAGTACCCCTCCTCATGCAGAGATTTCCTTTTTATTTACTCTTATTATTACTCAGTGTCATAGTACCCTTTCAAGTAATTTCACAAACAGAAAGTACCGAACAAGCAATCCTACTCAGCCTCAAACATGAACTGGGGGACCCACCATCGCTCCGATCATGGATACCGTCATCGTCGGCGCCGTGCGACTGGGCGGAGATTCGCTGCGGCGGCGGCGGTGCCGTCACGAAGCTCCTCCTCTCCGGCAAAAACATCACCACCACCACCGAGAAGCTCTCTTCCACAATTTGCAACCTCAAACACCTCTTGAAGCTCGACCTCTCCCGCAACTTCATCTCCGGCGAGTTCCCGACAACGTTGTACAACTGCTCCAAACACCTCCGGCACCTCGACCTGTCGTACAACAACCTCACCGGACCAATCCCCAACGACGTCGACCGCCTCAAAACGCTCACTTACCTCAACCTCAGCAGCAACTACTTCTCCGGCGAGATCCCGCCGGCGATCGGAAACCTGCCGGAGCTGCAAACATTAATCCTTAACAATAACAACCTCAACGGAACCATCCCCGGGGAAATCGGAAACCTATCCAATCTCGAAATCTTGAGTTTGGCATATAACCCTACTCTCAAACCCGCGAAAATCCCGTTGGAGTTTGCGAGATTGAGAAAACTGAGGTTCATGTGGATGACGCGCTGTAACTTGATCGAAGAGATTCCAGAATCTTTGGGGAATATTCTCACGAATCTGGAACAGTTGGATTTGTCGAGGAACAACTTAACAGGGAGCATTCCTCGGAGTTTGTTCTCGCTGAGGAAGTTGAAGTTCTTGTACCTGTACTATAACAAGTTGTCGGGTGTAATACCTAGCCCCACGATAAAGGGTTTGAATTTAACCGAACTCGATTTCGGTAAGAACAATTTGACGGGTCCCATACCCCGAGAGTTTGGAAACTTGAAGAATTTGGTTACCTTGCATTTGTATTCGAATCACTTGTCCGGTGAGATTCCCGCAAGTTTAAGCCTTCTTCCCAATCTTGAGTATTTCAGGGTTTTCAACAATAGCTTGAGTGGAACACTGCCTTTGGAACTAGGCTTGCATTCGAGGCTTGTTGCGGTTGAGGTTTCAGATAATCATCTCAGTGGTGAGTTGCCAAAACATTTGTGTGCAGGTGGTGCTCTCATAGGAGTTGTTGCTTTTTCCAACAATTTTAGCGGGGTTTTGCCTCAATGGATTGGGAACTGTCCTTCCCTCGCCACGGTTCAGGTTTTTAATAACAAATTTTCCGGGGAGATTCCTTTGGCTTTGTGGACTTCCATGAACCTTTCTTCCTTGGTTTTGAGCAACAACTCCTTCTCTGGGACTCTTCCGAGTAAAGTGTTTTGGAATATAACAAGGATTGAGATCGCAAATAACAAGTTCTCGGGTAAGATATCTGCTGGGATTACTTCAGCTGCGAATTTGGTTTATTTTGATGCGAGAAACAACGTGCTTTCCGGTGAAATTCCAAGGGAATTGACGCGTCTTTCTCGGCTTAGTACTCTCATGCTTGATGGTAACCAACTCTCTGGTGAACTTCCATATGAGATTGTTTCATGGAAATCACTGAGTGCTATGACACTCTCAGGAAACAAATTTTCTGGCCAAATCCCTCTTGCTATGACTGCTCTTCCTAGCTTGGCTTACTTGGACTTGTCTCAAAATGACATAACAGGTGAAATCCCAGCTCAGTTTGATAGATTGAGGTTTGTTTTTCTCAACATGTCCTCCAACCAGCTATTTGGGAAAATCCCTGATGAGTTTAATAATCGCGCATTTGAAAACAGTTTCTTGAACAATCCTCGTCTGTGTGCTCACAATCCAAACGTCAACCTTCCTAACTGCTTCACCAAAAACGCGTCACACTCTAGCAATTCATCTTCAAAATCACTTGCTCTGATTCTTTCTGCCATCATCGTTGTGTTGCTGGCCATAACCTCATTGATTTTCTATACGCTGAAAACGCAATGGGGCAAAAGGCATTGCGGGCATAGTAAGGTTGCAACGTGGAGAGTCACCTCATTCCAGAAGCTTGATCTAACGGAAACAAACTTCCTCTCAAGTTTGACAGACAATAACCTCATAGGAAGTGGAGGGTTTGGGAAAAGCCTTACTGATGCATTCGATGAGGATATCGAAGATCCACGTTATGTGGAACAGATGACGAGTGTCTTCAAATTAGGCCTCCTTTGCACAACCTCGTTGCCCTCAACTAGGCCTTCCACGAAGGAGATTTTGCAAGTTCTTCGTCATTGTTGTCATTCAGGTTCTACGCTTAGAAGAGTGGGAAACGAGGTTGATATCACTCCTCTTCTTGGTGACACAAGGTACATCTATAGTTACAAGGAGAGTAATGCTGCAAGCAATAATTCATCTTGGTGA 2427 0.4565 MSKVPLLMQRFPFYLLLLLLSVIVPFQVISQTESTEQAILLSLKHELGDPPSLRSWIPSSSAPCDWAEIRCGGGGAVTKLLLSGKNITTTTEKLSSTICNLKHLLKLDLSRNFISGEFPTTLYNCSKHLRHLDLSYNNLTGPIPNDVDRLKTLTYLNLSSNYFSGEIPPAIGNLPELQTLILNNNNLNGTIPGEIGNLSNLEILSLAYNPTLKPAKIPLEFARLRKLRFMWMTRCNLIEEIPESLGNILTNLEQLDLSRNNLTGSIPRSLFSLRKLKFLYLYYNKLSGVIPSPTIKGLNLTELDFGKNNLTGPIPREFGNLKNLVTLHLYSNHLSGEIPASLSLLPNLEYFRVFNNSLSGTLPLELGLHSRLVAVEVSDNHLSGELPKHLCAGGALIGVVAFSNNFSGVLPQWIGNCPSLATVQVFNNKFSGEIPLALWTSMNLSSLVLSNNSFSGTLPSKVFWNITRIEIANNKFSGKISAGITSAANLVYFDARNNVLSGEIPRELTRLSRLSTLMLDGNQLSGELPYEIVSWKSLSAMTLSGNKFSGQIPLAMTALPSLAYLDLSQNDITGEIPAQFDRLRFVFLNMSSNQLFGKIPDEFNNRAFENSFLNNPRLCAHNPNVNLPNCFTKNASHSSNSSSKSLALILSAIIVVLLAITSLIFYTLKTQWGKRHCGHSKVATWRVTSFQKLDLTETNFLSSLTDNNLIGSGGFGKSLTDAFDEDIEDPRYVEQMTSVFKLGLLCTTSLPSTRPSTKEILQVLRHCCHSGSTLRRVGNEVDITPLLGDTRYIYSYKESNAASNNSSW 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0066 808 Pfam Leucine rich repeat N-terminal domain 36 71 IPR013210 -
Aed10g0066 808 Gene3D Ribonuclease Inhibitor 33 214 IPR032675 -
Aed10g0066 808 ProSiteProfiles Leucine-rich repeat profile. 251 273 IPR001611 GO:0005515
Aed10g0066 808 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Aed10g0066 808 Pfam Leucine rich repeat 234 286 IPR001611 GO:0005515
Aed10g0066 808 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 716 780 - -
Aed10g0066 808 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 17 717 - -
Aed10g0066 808 Pfam Leucine Rich Repeat 299 321 IPR001611 GO:0005515
Aed10g0066 808 SMART LRR_typ_2 249 273 IPR003591 -
Aed10g0066 808 SMART LRR_typ_2 559 582 IPR003591 -
Aed10g0066 808 SMART LRR_typ_2 511 535 IPR003591 -
Aed10g0066 808 SMART LRR_typ_2 443 465 IPR003591 -
Aed10g0066 808 SMART LRR_typ_2 101 125 IPR003591 -
Aed10g0066 808 SMART LRR_typ_2 127 150 IPR003591 -
Aed10g0066 808 SMART LRR_typ_2 174 198 IPR003591 -
Aed10g0066 808 SMART LRR_typ_2 321 345 IPR003591 -
Aed10g0066 808 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 716 780 - -
Aed10g0066 808 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 17 717 - -
Aed10g0066 808 Gene3D Ribonuclease Inhibitor 215 296 IPR032675 -
Aed10g0066 808 Gene3D Ribonuclease Inhibitor 468 534 IPR032675 -
Aed10g0066 808 Gene3D Ribonuclease Inhibitor 535 620 IPR032675 -
Aed10g0066 808 SUPERFAMILY L domain-like 43 387 - -
Aed10g0066 808 SUPERFAMILY L domain-like 298 604 - -
Aed10g0066 808 PRINTS Leucine-rich repeat signature 129 142 - -
Aed10g0066 808 PRINTS Leucine-rich repeat signature 249 262 - -
Aed10g0066 808 Gene3D Ribonuclease Inhibitor 297 467 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0066 Aed-Chr10 455843 459005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0066 716 787 Receptor kinase-like Gene Family AT5G25930 48.611 1.78e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0066 - K00924 gmx:100782076 1117.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0066 10 455843 459005 Aed10g0066 10 455843 459005 ECH