Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0061 ATGGATGACGAGGAGAGAGAGAGGCTTCTGGAGAGGGAGAGATTGCAAATCCAGGTGATTCGCCAGCTCGATCTCGAGGACCTCGAAGTCGAAGAAGTGGATCACTCTGACGACGAAGACGACGATGCCGCCGCCGACGACGAACCCGACGAGGAGTATGCGCTTTTCCTTTCGCAATACCATGCCTCTAGTCCTCCTCCTCTTGCCTCCTCCGCTGAATTCAATTTCGACACCTATATCGCGCCTTTGCATACCTATCTCGGTGATGTTGAAGACACGCGCCACAGGACTGCGTTCTTGGACGGTGGCGCCATATTGAGCCTTCCACTCTTCTGTCTCCGAGGAGTTGTACTCTTTCCTGGGGCTACTCTTCCCCTTAGAGTTATCGAACCTCGTTTGATGGCTGCTGTTGAGAGAGCTCTAACTCAAGAGGATATTCCTTATACCATTGGTGTGATTCGAATTCACAGGGATACTGCAACTCGTAGGACAAAAACAGCAAGCATTGGGACAACTGCAGAGATTCAAAAATTTGGGCGTCTAAGGGATGGTTCACTGAATGTGGTTACCCGTGGACAACAACGATTTCGCCTAAGACGGTCCTGGACTGATGTGGATGGAGTGCCTTATGGAGAGATCCAAATTATTGAGGAAGATCTGCCACTGAGAATTCCAAGGGATGCTTTTGGCAAATTACCGCCATTGAATAATATGCCCTGTAGCCAAGCTGTCTCACATACGTTGTCTCCAAAGTATTCCCATGTTAAAATGCAAAGGTCAAAAAATGAGGAAAGTGATTCAGAACCAAATTCAGAAGAGAGTTTTGAGAGTGAGCTCTCACTGATGGAAAGGAAAATCCATCTATCAGTTGTTGGCTCCAGTTTTGTGAATGATACGATCGATGAATCAGCAAACGACAGTGACATTAAATCCATGCGTAAGTCAGATCAGGAAATTAGATCCAATCTGGATTCAAGAATGGGGAAATGTTCCACTTCTGGAGAGCAGACATCCAATGAAGAGTTTAATAGATGTAAAAATATATGTGCCTACCCGTCTCATAAGATTTCAAAAGCATTCTTGCCCCACTGGGCATATCGGATGTTTGACTCTTATTCACTTGCACAAAGGGCTGCAGATATGTGGAAGCGAATAGTTGGGATGCCTAACATGGATAGTCTCATTAAGAAGCCTGATGCTTTATCATTTCACATAGCCAGTAAAATACCAGTGTCTGAGTCTACAAGGCAGGAGCTTTTGGATATTGATGGCATTGCATATAGGCTGCGTAGGGAAATTGAATTACTAGAGAGCATTGATCTTGTCCGGTGTAAAAGCTGTGAGACTATAATTGCAAAAAGAAGTGATATGTTGGTGATGTCAAGTGAGGGTCCTCTTAGTGCATATGTGAATCCAGGTGGTTATGTGCATGAGATAATGACTCTTTACAAGGCAAATGGTTTAGCTCTCATTGGACCAGCAGTAGCAGAATACAGTTGGTTTCCTGGGTATGCATGGACAGTCGCAACTTGTGCAACATGTAAAACCCAAATGGGATGGCTTTTTACAGCCAGGAACAAAAAACTAAAACCCAGCTCTTTCTGGGGAATTCGGAGCTGTCAACTTGCTGAAGAAATACGCCAAAACCTTTAG 1653 0.4489 MDDEERERLLERERLQIQVIRQLDLEDLEVEEVDHSDDEDDDAAADDEPDEEYALFLSQYHASSPPPLASSAEFNFDTYIAPLHTYLGDVEDTRHRTAFLDGGAILSLPLFCLRGVVLFPGATLPLRVIEPRLMAAVERALTQEDIPYTIGVIRIHRDTATRRTKTASIGTTAEIQKFGRLRDGSLNVVTRGQQRFRLRRSWTDVDGVPYGEIQIIEEDLPLRIPRDAFGKLPPLNNMPCSQAVSHTLSPKYSHVKMQRSKNEESDSEPNSEESFESELSLMERKIHLSVVGSSFVNDTIDESANDSDIKSMRKSDQEIRSNLDSRMGKCSTSGEQTSNEEFNRCKNICAYPSHKISKAFLPHWAYRMFDSYSLAQRAADMWKRIVGMPNMDSLIKKPDALSFHIASKIPVSESTRQELLDIDGIAYRLRREIELLESIDLVRCKSCETIIAKRSDMLVMSSEGPLSAYVNPGGYVHEIMTLYKANGLALIGPAVAEYSWFPGYAWTVATCATCKTQMGWLFTARNKKLKPSSFWGIRSCQLAEEIRQNL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0061 550 CDD CRBN_C_like 442 538 IPR034750 -
Aed10g0061 550 PANTHER BNAA09G40760D PROTEIN 6 543 - -
Aed10g0061 550 Gene3D Peptide methionine sulfoxide reductase. 435 550 - -
Aed10g0061 550 MobiDBLite consensus disorder prediction 306 337 - -
Aed10g0061 550 Pfam ATP-dependent protease La (LON) substrate-binding domain 108 437 IPR003111 -
Aed10g0061 550 SMART lon_5 107 438 IPR003111 -
Aed10g0061 550 Gene3D - 370 434 - -
Aed10g0061 550 Gene3D - 88 216 IPR046336 -
Aed10g0061 550 PANTHER CEREBLON 6 543 - -
Aed10g0061 550 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 442 532 IPR004910 -
Aed10g0061 550 MobiDBLite consensus disorder prediction 252 278 - -
Aed10g0061 550 ProSiteProfiles Lon N-terminal domain profile. 108 438 IPR003111 -
Aed10g0061 550 MobiDBLite consensus disorder prediction 306 323 - -
Aed10g0061 550 SUPERFAMILY PUA domain-like 107 437 IPR015947 -
Aed10g0061 550 ProSiteProfiles CULT domain profile. 439 546 IPR034750 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0061 K11793 - gmx:100779918 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0061 10 417155 422608 Aed10g0061 10 417155 422608 ECH