Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0059 ATGGACCGCTTGCGTCCTAGGAATCGAGCGGTCTTTACTGGATTCACAAAAGCCGAGATTGAGAAAATGGAGAAATTGTTAAGGGAACCTATGGGGGGATCATTGGGCAAGGAATTTTACCAAAAACTGGCTCGAAGTTTCAACCTTTCCTCTGGTCGTGCTGGGAAGCCTATCATAAAATGGACAGAGATTGAAAGTTGGTTTCAGACAAGGCTCCAAGACTCACCACAAGTCCCTATCAGTGAGTTGATGGTTCCTAAATGTAAGGAAGGAGAAACTATGCAAGACCCATCAGAGTTGGAATTTGAAGCAAGATCATCAAAAGATGAAGCATGGTATGATGTGCAGGCATTTCTAGCTCACAGATTTCTTAGCACAGGGGAAGCTGAAGTTCGTGTCAGATTTGTTGGATTTGGAGTTGAGGAAGATGAGTGGATCAATATCAAAACTTCAGTACGCCAACGCTCTGTTCCTTTCGAAAACACAGAGTGTTCCAACCTGAATATTGGAGACCGAGTCCTGTGCTTCCAGGAGAGGAGAGATCAAGCAATTTACTATGATGCTCGCATTGTAGAGATCCAAAGGAGAATGCATGATATTAGAGGTTGCAGATGTCTCATCTTAATTTGTTATGATCACGACAACAGTGAGGAAAGAGTTCGCTTGAGGAGACTTTGCCGCAGACCAAGATCTTAG 696 0.4368 MDRLRPRNRAVFTGFTKAEIEKMEKLLREPMGGSLGKEFYQKLARSFNLSSGRAGKPIIKWTEIESWFQTRLQDSPQVPISELMVPKCKEGETMQDPSELEFEARSSKDEAWYDVQAFLAHRFLSTGEAEVRVRFVGFGVEEDEWINIKTSVRQRSVPFENTECSNLNIGDRVLCFQERRDQAIYYDARIVEIQRRMHDIRGCRCLILICYDHDNSEERVRLRRLCRRPRS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0059 231 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 9 76 IPR039276 -
Aed10g0059 231 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 88 230 IPR039276 -
Aed10g0059 231 PANTHER OS09G0346900 PROTEIN 88 230 - -
Aed10g0059 231 Gene3D - 159 231 - -
Aed10g0059 231 Pfam SAWADEE domain 99 226 IPR032001 GO:0003682
Aed10g0059 231 Gene3D - 97 158 - -
Aed10g0059 231 PANTHER OS09G0346900 PROTEIN 9 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0059 Aed-Chr10 401180 405319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0059 - - gmx:100801021 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0059 10 401180 405319 Aed10g0059 10 401180 405319 ECH