Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0057 ATGAAACCAAGATCAGACACGCACTTCCCTCTGCCACATGTGGCAGACATAACGTGCATGGATCCCAACCGGCCACCACAGCAACTCGTCGCCGAGAAGCTCTCCAAAACGGTGCGTTTCGTAGCCTTCTTTATACAAAACGGCGTTTCCAAGAGCAAACTCATCCACGACGTGAAGAACATAGGTAAGGCGCTCAACGACGTTGTGGCTCGCAACCACCAGGCCCTCACGTGTCGCCCACGTGACGCGCACGTGTCCTTCGTCTCGCCCTTGGAGTACCAGTTCAGCTGCAGCGGGACTCCGCCGCGCCTCTCGCATGCCGGCCGGAGGAAGCTCTCTCCGCCCTCCGCCACCTCTCGACGCTCGCCGGCTCACCGGGCGGTGAGGATGTGCCGCGGCGGCACTGACATCGGCACGATGGAGAGGCGCGTGAAGATCACGGGCTCCGCCGCTTCCATGTTGAAGGACCGTGCGGAGAAGGATTTTCACGTGGACGAGGCTGCGGAAGAGTTCATAGCGAGGTTTTACAGAGAGTTGAGGTTGCAGAAATGGTTGGATCACTGTTAA 567 0.5908 MKPRSDTHFPLPHVADITCMDPNRPPQQLVAEKLSKTVRFVAFFIQNGVSKSKLIHDVKNIGKALNDVVARNHQALTCRPRDAHVSFVSPLEYQFSCSGTPPRLSHAGRRKLSPPSATSRRSPAHRAVRMCRGGTDIGTMERRVKITGSAASMLKDRAEKDFHVDEAAEEFIARFYRELRLQKWLDHC 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0057 188 MobiDBLite consensus disorder prediction 98 125 - -
Aed10g0057 188 Pfam Cotton fibre expressed protein 163 183 IPR008480 -
Aed10g0057 188 PANTHER DUF761 DOMAIN PROTEIN 20 187 - -
Aed10g0057 188 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 20 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0057 Aed-Chr10 387709 388275 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0057 - - gmx:102666753 294.664