Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0042 ATGGCTTTCATCTCTTTGCCTTCAATCAGAAACATCATTTCATGGCCAACTATGCTTGTTCATGACATGTCAGCTAAATCTCATAATAACAATAAAGGGAAACGCAACCTCCGAGACTTGACCGTGGCAAACGTTGCAAGTCCATCATTACCTGTGATTGCCCCTCCAACACCGGAGGAAAGGCCAGGGAACACCGGCGGCGGAGGCCGTCACCACCACCATCATCATGTTGCATGGACTAGTATCCCGCAAGAGAGATGGGAGGGAGAGTTACAAGTTCAAGGACAAATACCACTATGGCTGAAAGGAACGTACCTAAGGAATGGTCCGGGAATGTGGCACATAGGGGAGCACAAGTTCCGGCACCTGTTCGACGGCTACGCCACGGTGGTGAATCTCCGGTTCGAGAAGGGACGGTTAGTGGCGGGGCACCGTCAAATCGAGTCGGAGGCGTACCGGGCGGCCAAGAAGAACCAGAAGATATGTTACAGGGAGTTCTCCGAAGTGCCTAAGGCGGCCAATTTCCTCGCCTACGTCGGGGAGCTGGCCAACCTGTTCTCCGGCGCGTCGCTTACCGACAACGCAAACACCGGCGTGGTCAAGCTCGGCGACGGAAGGGTGGTGTGCCTCACGGAGACTCAGAAAGGGTCCATTGTGATAGACCCCGACACGCTGGAGACGGTGGGGAAGTTCGAGTACAGTGACTCGCTGGGTGGACTCATTCACTCGGCGCACCCCATTGTGACGGATCACGAGTTTCTGACTCTGTTGCCTGATTTGGTTAGAGCGGGGTATCGTGTTGTGAGGATGGAGCCAGGCACCAATGAGAGGAAAGTCATTGGAAGGGTCAACTGTAGAGGCGGTCCTTCACCTGGTTGGGTTCACTCTTTTCCCGTTACTCAACATTATGTCGTTATCCCCGAAATGCCCCTCAGGTACTGCGCTCAGAATCTTCTCAAGGCTGAACCTACTCCTTTGTATAAGTTTCAGTGGCACCCTCACTCTAAAGCCTTCATGCATATCATGTGCAAGACTACTGGAAACATCGTGGCGAGTGTGGAAGTGCCTCTGTTTGTTACTTTCCATTTCATAAATGCATACGAGGAGAAAGATGAAGATGGGAGGGTCACTGCGATTATTGCCGACTGTTGTGAACACAATTCAGATACTTCCATTCTTGATAGGCTTAGGTTACAGAACCTTCGATCGTTTAATGGTGAAGATGTTCTACCTGATGCAAGGGTCGGTCGGTTCAGAATACCACTGGATGGAAGTAGTCCATATGGAACATTAGAGGCAGCATTGGACCCGAATGAACATGGGAGAGGCATGGACATGTGCAGCATTAACCCTAATTATTTAGGGAAGAAATATAGATATGCATATGCTTGTGGAGCACAACGACCTTGTAACTTTCCCAACACCCTCACCAAGCTTGATTTTGAATTGAAAAAGGCTAAGAACTGGCATGAAGAAGGTGCTGTACCCTCAGAACCCTTCTTTGTGGCACGACCAGGAGCAACAGAGGAAGATGATGGCGTGGTAATCTCCATTGTCAGTGAGAAAAATGGAGAAGGATATGCATTGGTGTTAGATGGTTCCACTTTTGAAGAGATTGCTAGGGCCAAATTCCCCTATGGACTTCCATATGGCTTGCATGGATGCTGGGTTCCAAAAGAGTAA 1683 0.4985 MAFISLPSIRNIISWPTMLVHDMSAKSHNNNKGKRNLRDLTVANVASPSLPVIAPPTPEERPGNTGGGGRHHHHHHVAWTSIPQERWEGELQVQGQIPLWLKGTYLRNGPGMWHIGEHKFRHLFDGYATVVNLRFEKGRLVAGHRQIESEAYRAAKKNQKICYREFSEVPKAANFLAYVGELANLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPDTLETVGKFEYSDSLGGLIHSAHPIVTDHEFLTLLPDLVRAGYRVVRMEPGTNERKVIGRVNCRGGPSPGWVHSFPVTQHYVVIPEMPLRYCAQNLLKAEPTPLYKFQWHPHSKAFMHIMCKTTGNIVASVEVPLFVTFHFINAYEEKDEDGRVTAIIADCCEHNSDTSILDRLRLQNLRSFNGEDVLPDARVGRFRIPLDGSSPYGTLEAALDPNEHGRGMDMCSINPNYLGKKYRYAYACGAQRPCNFPNTLTKLDFELKKAKNWHEEGAVPSEPFFVARPGATEEDDGVVISIVSEKNGEGYALVLDGSTFEEIARAKFPYGLPYGLHGCWVPKE 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0042 560 PANTHER BETA-CAROTENE DIOXYGENASE 74 559 IPR004294 GO:0016702
Aed10g0042 560 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 74 559 - -
Aed10g0042 560 MobiDBLite consensus disorder prediction 48 75 - -
Aed10g0042 560 Pfam Retinal pigment epithelial membrane protein 84 558 IPR004294 GO:0016702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0042 K17913 - gmx:100814148 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0042 10 291903 294525 Aed10g0042 10 291903 294525 ECH