Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0036 ATGTGCCTGTGTTTTGAAGTTACCAAAACTGTGAAGATAGAAGCACCAAGCTACATGGCGGCTTCATATAAAAAAACGTTCCTAGTGAATTGCTCCATTCAGAAAAGACCCTCCTATGTCTCACACAATTCTCGTCACTACAACCTTCCACTCAAGAAAGTTCTGCCTAAAGTCCCCTTGTTGCATATTGAACATGTTCACAAAACCATGTCAAACACTGCAGCTAAATTACTAGACGCTTTTGTAGATTCATTCTTTGAATTTATTGATCAACCACTGCTTCCATCTCAAAGTAACTTTGCTCCGGTGGCGGAGGAGTTAGGTGAAGCTATACCTGTGACTAGCATCCAAGGACAAATTCCAGTTGATTTTCCCGAGGGTGTCTACATTAGAAACGGACCAAATCCACTTTTTGGAGGACTAAAATCAACAAACTCTATCTTTGGGAGGTCTAGTCACATTTGGGTGGAAGGAGAGGGAATGCTTCACGCCTTGTATTGTAAAAGATCAAGTCATAGGATCTGTACTGTCCTCTACAACAACAAGTACGTTGAAACCGATACATACAAGGTTGAAAAGCAACGAAGCAAACCATCGTTTCTACCGGCCATAGAGGGAGATTCACCAGCCATTTTGTCTGCTTATCTGCTAAATTGGTTGCGATTTGGCAAAGTGAACAAGTACATCAGCAACACCAATGTCTTTGAGCATTCGGGGAAGTTTTACTCGGTTGCTGAAAGTCACACCCCACAAGAGATTGATATCCTTACACTGAAAACTTTAGGAAATTGGAATGTCAATGGCACCTGGGATCGTCCTTTTACTAGTCATCCAAAGAAAGCACCTGGGACAGGGGAACTAGTTACATTAGGGGTTGCACCAGTGAAACCTTTTGCCGTAGTTGGAATTATTTCTGCTGATGGAAACAAATTGGTTCACAAAGTTGACCTCAAACTAGACAGGTGCACTCTTTGCCATGAATTGGGGGTGACACAGAGGTACAATGTGATCATGGATTTTCCACTAACCATTGATCTAAACAGACTTCTTAGTGAAGGCCCATTAATAAAGTATAACAAGGAGGAATATGCACGGATTGGGGTAATGCCACGCTATGGTGATGCCAACTCAATCAAATGGTTTGAGGTGGAACCTAATTGCACTTTTCACATTATCAATTCTTTTGAGGATGGTCACGAGGCAACGAGGGGCTGCAGATCTCTAGATTCACTAATTCCTGGACCTGATCCGAGTTTGAAGGAATTTGAGTGGCTATCTCGTTGCTACGAGTGGCGATTGAACATGCAAACGGGAGAAGTTAAGGAGAAAAATCTCTGTGGAGCCAATGCAGTTTATATGGATTTTCCTATGATCAATGGAAACTTCATAGGTATTAGGAACAGATATGCATACACTCAAGTAGTTGATCCCATTGCAAGCTCTACTCAAGATGTGCCAAAATACGGAGGTTTAGCAAAGCTCTACTTTGAAGAATCATGTGCAAAGGTCTCCATGCAGAGAAACAACGAGCAACATGAAGAGCCAATAAGAGTGGAATGCCACATGTTTGGGAAGAACACATTTTGCAGTGGGGCTGCCTTTGTCCCCAAAGATGGGGGCCATGAAGAAGATGACGGTTGGATCATAGCTTTTGTTCACAATGAAGATACAAACATATCTGAAGTTCATATAATTGACACAAAGAAGTTTTCTGGTGAAACGGTTGCCAGAATTACAATGCCTCGCAGAGTACCATACGGATTTCATGGAGCTTTCATGCCAATTTCATTTGAGGCATAG 1800 0.4211 MCLCFEVTKTVKIEAPSYMAASYKKTFLVNCSIQKRPSYVSHNSRHYNLPLKKVLPKVPLLHIEHVHKTMSNTAAKLLDAFVDSFFEFIDQPLLPSQSNFAPVAEELGEAIPVTSIQGQIPVDFPEGVYIRNGPNPLFGGLKSTNSIFGRSSHIWVEGEGMLHALYCKRSSHRICTVLYNNKYVETDTYKVEKQRSKPSFLPAIEGDSPAILSAYLLNWLRFGKVNKYISNTNVFEHSGKFYSVAESHTPQEIDILTLKTLGNWNVNGTWDRPFTSHPKKAPGTGELVTLGVAPVKPFAVVGIISADGNKLVHKVDLKLDRCTLCHELGVTQRYNVIMDFPLTIDLNRLLSEGPLIKYNKEEYARIGVMPRYGDANSIKWFEVEPNCTFHIINSFEDGHEATRGCRSLDSLIPGPDPSLKEFEWLSRCYEWRLNMQTGEVKEKNLCGANAVYMDFPMINGNFIGIRNRYAYTQVVDPIASSTQDVPKYGGLAKLYFEESCAKVSMQRNNEQHEEPIRVECHMFGKNTFCSGAAFVPKDGGHEEDDGWIIAFVHNEDTNISEVHIIDTKKFSGETVARITMPRRVPYGFHGAFMPISFEA 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0036 599 Pfam Retinal pigment epithelial membrane protein 100 594 IPR004294 GO:0016702
Aed10g0036 599 PANTHER BETA-CAROTENE DIOXYGENASE 50 595 IPR004294 GO:0016702
Aed10g0036 599 PANTHER OS06G0162550 PROTEIN 50 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0036 Aed-Chr10 249708 253116 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0036 - - gmx:100817738 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0036 10 249708 253116 Aed10g0036 10 249708 253116 ECH