Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0035 ATGGAAACTTCATACACGACGAGTCTTGAACCTAAATATTGCTCCATTCAGAAACGACGACGTCCCTTTATCGTCCCACACCAACACCATACCATTACTTTGGGACTTTCGTCTGCTTTCAAGCCGATCTTAAGAGCGATGACACCTCAAATTGATGCTTCCAAAACCATCACAGACATTAAAACTAAATTTCTTAACGCTCTTGTGGATTCAGCATTTGAGTTTGTCAACCAGCTTGTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGAGGAGTTAGGAGAAGCTGTGCCTATCACTTATGTTGAAGGAGACATACCAGACCACTTTCCAGAGGGTGTCTTCATTAGAAATGGTCCGTACGGACCAAACCCACTGTTTGGAGGATTTAAATCATCAAAGTCTATATTGGGAAGGACAAATAGCGTTTGGGTGGAAGGAGAAGGAATGCTTCATGCTTTGTATTTCAAAAGGCAAAGTGATGAGTGCTGCACCATAGTCTACAACAACAGATACGTTGAAACTGAAACATACAAGCTTGAGAAACTAAGTACCAAACCTTTATTTATCCCTGCCGTCAAAGGAGACTCATTTGCCGTTTTGTCTTCCATGCTTCTTAACGGGCTGAGATTTGGACAACTAAATAAAGATTATAGCAACACCAATAAAGTTCCAGGAACAGGAGAGCTGGTTATTTTTGGGGTGGATGCAACTAAACCTTATCTTGAAATTGGAATAGTTTCTGCTGATGGAATGGAATTGGTTCATAAAGAAGACATAAAACTAGACAGATGCTCTTTATGCCATGATATAGGTATCACAAGCAGGATTGGAATAATGCCTCTCTATGGTGATGCAAACTCAATCCAATGGTTTGAGGTGGAACCTAATTCCACATTTCATATCATCAATTCCTTTGAGGATGGTCATGAGGTTGTGTTGTGGGGTTGTAGAGCACTAGATTCACTAATTCCAGGACCTGAAGATGGTCTAAATGAATCAACGTTGTTCTCTCGGTGTTATGAATGGCGATTAAACATGAAAAGTGGTGAGGTTAAGGAAAAATATCTCACTGGACCAGACCAGTTTATGGATTTTCCAGTAATCAATGCAAGTTTTACAGGAATTAAGAATCGATACGGATACACCCAAGTGGTTGATCCCGCTGCAAGTTATGCTGCAGATATTCCAAAATATGGAGCTTTAGCGAAGCTATACTTTGGAGAACCGTGTTCAGAATTCCCTGTGGGAGATACACAGCAAGAAGAGCCTATAAGGGTGGAATACCATAGGTTTGAAAGAAATGTATTTTGCACTGGATCTGCCTTTGTCCCTAAGGAAGGAGGCATTGAAGAAGATGATGGTTGGATAATCACTTTTGTTCACAATGAAGATACCGGCATATCTCAAGTTCATATAATTGACACAAAGAAGTTTTCTGGCGAGGCAGTGGCCAAAATTACCATGCCTTGCAGAGTTCCATATGGGTTTCACGGAGCTTTCATGCCAATCTCATTTTAG 1521 0.4096 METSYTTSLEPKYCSIQKRRRPFIVPHQHHTITLGLSSAFKPILRAMTPQIDASKTITDIKTKFLNALVDSAFEFVNQLVLPSQSNFAPVEELGEAVPITYVEGDIPDHFPEGVFIRNGPYGPNPLFGGFKSSKSILGRTNSVWVEGEGMLHALYFKRQSDECCTIVYNNRYVETETYKLEKLSTKPLFIPAVKGDSFAVLSSMLLNGLRFGQLNKDYSNTNKVPGTGELVIFGVDATKPYLEIGIVSADGMELVHKEDIKLDRCSLCHDIGITSRIGIMPLYGDANSIQWFEVEPNSTFHIINSFEDGHEVVLWGCRALDSLIPGPEDGLNESTLFSRCYEWRLNMKSGEVKEKYLTGPDQFMDFPVINASFTGIKNRYGYTQVVDPAASYAADIPKYGALAKLYFGEPCSEFPVGDTQQEEPIRVEYHRFERNVFCTGSAFVPKEGGIEEDDGWIITFVHNEDTGISQVHIIDTKKFSGEAVAKITMPCRVPYGFHGAFMPISF 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0035 506 PANTHER BETA-CAROTENE DIOXYGENASE 223 504 IPR004294 GO:0016702
Aed10g0035 506 PANTHER OS06G0162550 PROTEIN 36 222 - -
Aed10g0035 506 Pfam Retinal pigment epithelial membrane protein 275 503 IPR004294 GO:0016702
Aed10g0035 506 Pfam Retinal pigment epithelial membrane protein 89 222 IPR004294 GO:0016702
Aed10g0035 506 PANTHER OS06G0162550 PROTEIN 223 504 - -
Aed10g0035 506 PANTHER BETA-CAROTENE DIOXYGENASE 36 222 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0035 Aed-Chr10 243805 247247 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0035 - - gmx:100817207 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0035 10 243805 247247 Aed10g0035 10 243805 247247 ECH