Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0030 ATGTTAATTTCGTACTGGACAACAGATTACGCCGGAGCCACCTATGTGCATGGTGCCCACCCTTTTCTTCATGGATATGGTACACACTGGACACTTGTGCACTCTTCAATTCACTGCCGCACAACACAACTTCCTCTTGTTCTTGTTGTTGTTGTTTTTGTGTCTCTGGCAATGGAAGGCCTCTCAGATATGGAAAGTGTGATAGAAGAACCCCTTTTGAGGAAACAGAATTCCAAAGCCAAGGGTGGCTTCAGAACCTTACCTTTCATCATAGCAAATGAGGCCTTTGAGAGACTGGCTAGCCTGGGGATTATGCCTAACATGATATTGTACTTGACAAGAGAGTATGGCATGCAGACTGCAGAAGCCACTAATTTTCTCTTACTCTGGTCTGCTGCCTCAAATTTTACCCCTTTTGTTGGTGCTGTTCTTTCAGACTCCTATGTGGGTCGATATTCCATGATTGCTTTTGGATCTATTGCAAGCCTACTGGGGATGGTTCTTCTATGGTTAACAACTTTGATTCCTTTGACAAAGCCACTTTGTAACCAATTTACCAACAGCTGCAATAATAAGTCCCCTACAACAATTCACCTTTTGATCTTGTATTCTTCTTTTGCCCTCATGTCCATTGGAGCTGGAGGCATAAGATCATCCTCCTTGGCTTTTGGTGTTGATCAGTTGAGTAAGAGGGACAAAGAAATCAAAGAGAGCTACTTCAGCTGGTACTATGCTATTGTTGCAATGTCATCACTGATAGGTTTAACTGTTGTTGTCTATATTCAAGATAACATGGGGTGGACAGTGGGGTTTGGAATTCCTGTTATCCTAATGTTAGTAGCGACTGTATCATTTTTCTTAGCTTCTCCATTTTATGTAATGCTGGAGGTTAAAAGGAACATGCTAAGTGGGTTAACTCAGGTCCTTGTAGCCTCTTACAAAAATAGACTTCTGCAGTTACCACAGGAAACCGAGAATGGCATATACCACCTTGAGAAGGATTCGGATCTCTTAATACCATCTGAAAAACTAAGGTTTCTGAACAAAGCATGCATAATTACAAATCCCTTACAAGATCTAACACCAGAGGGAATTGCTTTGAATCCATGGAATCTTTGCACAGTAGAGAAAGTTGAAGAACTGAAGGCACTTATCAAGATAGTTCCAATTTGGACAACAGGAATCATGATGGGTGTGAACATCAGTCAGGGTTCCTTACTGGTACTAGAGGCATCCTCCATGGACCGCCACATTACTTCAAACTTCGAAATTCCACCAGGCTCCTTTGTAACATTTATGATCGTATCTCTAGTACTTTGGGTTATAATCTATGACCGCATTTTAGTCCCTGTGGCATCAAAGATAAAAGGGTCCCCAACATGCATAGGAGCAAAACAGAAAATGGGAATTGGTCTTTTAACCAGTTCCATATCAATTGCATCCCTTGCAGTTGTAGAGAGTATCAGACGCAAAATTGCTATTGAGCAAGGTTATGAAGATCAACCACAAGCTGTGGTGAGCATGTCTGCTTTGTGGCTCTTGCCGCGCGAAATCCTTAATGGAGTGGCTGAGGCCTGTGGTGTAGTAGGACAGAATGAGTTTTTCCTCACTGAGCTACCTCGATCTATGTCTAGCCTTGCGTCCACTCTTAGTGGCCTTGGCACTTCTGTTGCAAATTTGGTTGCAAGTTTCATTCTGAGTGTTGTTGACAATGTTACTGGAGGTGGAGGGCAAGAAAGTTGGATTTCAAGCAACATAAACAAGGGGCATTATGACTACTACTATACTTTTATTTGTGCTTTGAGCTTTATGAATTTTGTATATTTTCTCTACTGTAGTAAATCTTATGGCCCTTGTAAGAATAGAGGAAAATAG 1875 0.4165 MLISYWTTDYAGATYVHGAHPFLHGYGTHWTLVHSSIHCRTTQLPLVLVVVVFVSLAMEGLSDMESVIEEPLLRKQNSKAKGGFRTLPFIIANEAFERLASLGIMPNMILYLTREYGMQTAEATNFLLLWSAASNFTPFVGAVLSDSYVGRYSMIAFGSIASLLGMVLLWLTTLIPLTKPLCNQFTNSCNNKSPTTIHLLILYSSFALMSIGAGGIRSSSLAFGVDQLSKRDKEIKESYFSWYYAIVAMSSLIGLTVVVYIQDNMGWTVGFGIPVILMLVATVSFFLASPFYVMLEVKRNMLSGLTQVLVASYKNRLLQLPQETENGIYHLEKDSDLLIPSEKLRFLNKACIITNPLQDLTPEGIALNPWNLCTVEKVEELKALIKIVPIWTTGIMMGVNISQGSLLVLEASSMDRHITSNFEIPPGSFVTFMIVSLVLWVIIYDRILVPVASKIKGSPTCIGAKQKMGIGLLTSSISIASLAVVESIRRKIAIEQGYEDQPQAVVSMSALWLLPREILNGVAEACGVVGQNEFFLTELPRSMSSLASTLSGLGTSVANLVASFILSVVDNVTGGGGQESWISSNINKGHYDYYYTFICALSFMNFVYFLYCSKSYGPCKNRGK 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0030 624 SUPERFAMILY MFS general substrate transporter 101 613 IPR036259 -
Aed10g0030 624 PANTHER PROTEIN NRT1/ PTR FAMILY 1.3 80 617 - -
Aed10g0030 624 CDD MFS_NPF1_2 87 616 - -
Aed10g0030 624 Gene3D MFS general substrate transporter like domains 65 622 IPR036259 -
Aed10g0030 624 Pfam POT family 153 582 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed10g0030 624 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 80 617 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0030 Aed-Chr10 200648 208656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0030 76 618 Organic Solute Cotransporters AT1G52190 52.803 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0030 K14638 - gmx:100809846 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0030 10 200648 208656 Aed10g0030 10 200648 208656 ECH