Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0025 ATGGCATCTATTAGAAGAACCTTGTCTCCTGTGCCTAAAGCTGGAACTGTAGCAAATGGAGAAATGTGTTCAGTAGCTTCTCCCTTGTCAAAGTCCTCGTCGAGTCCTCAGAACTTCTCACCATCGGCTGGATTGGACTACCGTGCACTTTTGTTTGGTGTTTTTTCCCCGAGGCCTTTCAGGGCTTTTGATAGATCAAAGCCAAGGGGGCAGCTTTGGAGGAAGGTGCTTTTTCATTTTTTCATTTGTTTCATGGTCGGTGTTTCTATTGGACTCATCCCACTTGCATCAACACACATGTCGGCAAACCTCATGCCAAAACAACAACAAGCCTTCTCCTTTGAGGTGATATCTGCAGTGGGAAATTTCCAGCCATTTGAAAATGTAAAGTTAAATGTGACGCCATCAATCGATGAGGCTGTGAATTTTAATGCTTCTTTGTATTCAACTGTGAAAGAACCGGAACTAATAGATGAAGTTGCATATAATATCTCTGATACACAAATCAGTGAAAATCCACATTTTGAGTCTCAGAAGCTTCTCATAATTGTGACCCCAACATACAATCATCTATTTCAAGCATATTACTTGCATCGGTTGTCACAGACATTAAAATTGGCCCCATCTCCCTTGTTGTGGATTGTTGTTGAGATGACTTCCCAATCTGAAGAAACTGCTGACATCTTAAGGAGTAGTGGGATTATGTACAGGCATCTCGTTTGTAAAACAAATCTAACCAACCCAAGCCATAGGAGCATTCTTCAAAGAAATTTTGCAATGGCTCACATTGAAACTCATCGTCTTGATGGAATTCTTTACTTTGCAGATGATCATAACATCTACTCGGTGGAACTCTTTCAGCAAATGAGAGAAATAAGGCGATTTGGAACATGGACTGTTGCAAGATTGTCAGGGGGTAAAAGTAGCATAGTCTTGCAAGGGCCCATTTGTAATGGAAACAGAGTAATTGGATGGCACACAAATGAATCAAATAAGAAATCTAGAAGATTTCATGCTGAAATGCCGGGTTTTGCCTTCAATAGTACCATACTCTGGGATCCAAAGAAGTGGCACCGCCCCACTCTTGAACCTATCAGGCAACTTGACTCGGTCAAGGAAAGTTTGTGGGTTAGCACATTGATTGAGCAGGTGGTTGAAGATGAAAGTCAAATGGAGGGCTTAATGGACAACTGCTTGAGAGTTATGGTCTGGCATATTGATCTTGAATCATCTTATTCGTTCTATCCTCAGCAGTGGACTGTAAAGAACAACCTAGATGCCATTGTTCATCTTCCACTTGTGTGA 1305 0.4146 MASIRRTLSPVPKAGTVANGEMCSVASPLSKSSSSPQNFSPSAGLDYRALLFGVFSPRPFRAFDRSKPRGQLWRKVLFHFFICFMVGVSIGLIPLASTHMSANLMPKQQQAFSFEVISAVGNFQPFENVKLNVTPSIDEAVNFNASLYSTVKEPELIDEVAYNISDTQISENPHFESQKLLIIVTPTYNHLFQAYYLHRLSQTLKLAPSPLLWIVVEMTSQSEETADILRSSGIMYRHLVCKTNLTNPSHRSILQRNFAMAHIETHRLDGILYFADDHNIYSVELFQQMREIRRFGTWTVARLSGGKSSIVLQGPICNGNRVIGWHTNESNKKSRRFHAEMPGFAFNSTILWDPKKWHRPTLEPIRQLDSVKESLWVSTLIEQVVEDESQMEGLMDNCLRVMVWHIDLESSYSFYPQQWTVKNNLDAIVHLPLV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0025 434 Pfam Glycosyltransferase family 43 200 409 IPR005027 GO:0015018|GO:0016020
Aed10g0025 434 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 180 427 IPR029044 -
Aed10g0025 434 CDD GlcAT-I 179 409 IPR005027 GO:0015018|GO:0016020
Aed10g0025 434 SUPERFAMILY Nucleotide-diphospho-sugar transferases 180 425 IPR029044 -
Aed10g0025 434 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED 1 428 - -
Aed10g0025 434 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 428 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0025 Aed-Chr10 177396 180812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0025 1 431 Glycosyltransferase AT1G27600 44.780 2.02e-122 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0025 K20869 - gmx:100808765 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0025 10 177396 180812 Aed10g0025 10 177396 180812 ECH