Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02768 ATGCTCAAGTATACTCACCCATTCTTCAACTTCTTGATTTCTAATATAATGAACAATCTTTTATATCTCTCGCTTTTAGCGGGAGCCGCGGCTTCCGCTTATTACTACGGTTCTGGCGAAGAGTCGCTGAACCGTAGTAAGCATTCTTTAATAACTTCGTTTTGTTTAGCGGCAGCTTTCACGTACCACTATCTTGTGAGGAGAACAAGATATGTTTTTTTGGTAGACTTCGCGTGCTTCAAACCAGGCCTCTCTTGTCTTTGCACCACCGAGATGATTCTAGAACGTGCCAAGCACGTGGGTTTTCTCTCAGAAGAGAGCCTCAAGTTGGTTGCAAAGATTTTAGACAGGTCTGGTTTGGGGCCGAAGACGTATCTACCGGAGGGAGTGTTGCATATTCCACCGAAGCTCACTTTTGATGAAGCGAGGAAGGAAACTGATACGGTGCTTTTTGGAGCTGTTGATGAGTTGCTTGAGAAAACTGGTGTTCAGAGTAAGGACATTGGGATTCTTGTTGTGAATTGTTGTTTGTTCAATCCTACTCCTTCTTTGTCAGACACCATTGTTAATCACTACAAGCTTAGAGGAAATATTCTCACCTATGATCTCAGTGGTATGGGGTGCAGTGCTGGTGTTCTTGCTGTGGATTTTGCCAAACAACTCCTTCAGGTACATCCAAATTCATATGCATTGGTGCTGAGTACAGAAAATGAAACTTCAAGCATTTACAGAGGCAACAACCCTTCAATGATGCTAACCAACTGCCTCTTCCGAATGGGTGGCTCGGCAGCTCTGCTCTCCAGCCACCCATCGGATCGCTGCCGTTCAAAATACCAGCTGATCCACACGCTTCGCACGCACGTCGGCGCCGACGACAACAGCTACAAATGTGTGTTTCAGGAAGAAGACGAGGCTCATAAAATCGGCGTTTCTCTGTCGAAAGAACTCATGAATGTGGCCAGGGACGCTCTCAAGATCCACATCACCTCCCTCGGTCCGGTTGTTCTCCCGATCTCGGAGAAAGTCAAGTTCGTCGTCAACTTCGTTAAACGCAAGTTTCTCAAGATCATGATTGAGGCTTACGTCCCTAATTTCACGTTAGCTTTCGACCATTTTTGCATCCACACAGGTGGGAGAGCTGTTCTTGATAGGATGCAAAAGAGTCTTGAGCTTGATGATTGGCACATGGAACCTTCTAGAATGACACTTTACAGGTTTGGGAACACATCATCAAGCTCTGTATGGTATGAATTGGCATACTGTGAGGCCAAAGGAAGAGTGAAGAAAGGTGACAGGGTTTGGCAAATGGCATTTGGATCTGGATTCAAGGTAAACACTGCTGTTTGGGTTGCATTGAAGAATATTGAACCACCTTTGAAGAATACTCCTTGGAGGGATGAAATTGATGATTTTCCAGTCAAACTCAATCCACCAAAGCCCACTAGTAATAACAAATAA 1458 0.4492 MLKYTHPFFNFLISNIMNNLLYLSLLAGAAASAYYYGSGEESLNRSKHSLITSFCLAAAFTYHYLVRRTRYVFLVDFACFKPGLSCLCTTEMILERAKHVGFLSEESLKLVAKILDRSGLGPKTYLPEGVLHIPPKLTFDEARKETDTVLFGAVDELLEKTGVQSKDIGILVVNCCLFNPTPSLSDTIVNHYKLRGNILTYDLSGMGCSAGVLAVDFAKQLLQVHPNSYALVLSTENETSSIYRGNNPSMMLTNCLFRMGGSAALLSSHPSDRCRSKYQLIHTLRTHVGADDNSYKCVFQEEDEAHKIGVSLSKELMNVARDALKIHITSLGPVVLPISEKVKFVVNFVKRKFLKIMIEAYVPNFTLAFDHFCIHTGGRAVLDRMQKSLELDDWHMEPSRMTLYRFGNTSSSSVWYELAYCEAKGRVKKGDRVWQMAFGSGFKVNTAVWVALKNIEPPLKNTPWRDEIDDFPVKLNPPKPTSNNK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02768 485 PANTHER 3-KETOACYL-COA SYNTHASE 31 475 - -
Adu10g02768 485 CDD CHS_like 48 449 - -
Adu10g02768 485 SUPERFAMILY Thiolase-like 257 450 IPR016039 GO:0016746
Adu10g02768 485 Pfam FAE1/Type III polyketide synthase-like protein 64 352 IPR013601 GO:0006633|GO:0016020|GO:0016747
Adu10g02768 485 SUPERFAMILY Thiolase-like 61 275 IPR016039 GO:0016746
Adu10g02768 485 PANTHER 3-KETOACYL-COA SYNTHASE 31 475 IPR012392 GO:0006633|GO:0016020|GO:0016747
Adu10g02768 485 Gene3D - 112 450 IPR016039 GO:0016746
Adu10g02768 485 PIRSF Very_long_ch_3-ktacl-CoA_syn 3 485 IPR012392 GO:0006633|GO:0016020|GO:0016747
Adu10g02768 485 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 369 449 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02768 Adu-Chr10 104247724 104253343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02768 2 484 Miscellaneous Gene Families AT1G04220 56.680 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02768 K15397 - gmx:100791995 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02768 10 104247724 104253343 Adu10g02768 10 104247724 104253343 ECH