Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02516 ATGGATTCATCGTCTATTTCCAGCAACGACGTCGTTTCGAAGGAGTCAATGGTTGACCCCTTCTTGGTGGAGGCTCTGCAGAACCCTCGCCACCGTCTCACCATTTTGCGAATGGAGCTGGATATCCAGAGGTTTCTAAACAATGCTGATCAGCAGCATTTTGAGTTCCCACATTTCCCTTCGTCCTATCTCAGATTGGCTGCACACAGAGTTGCTCAACACTATGGTATGCAGACAATGGTTCAAGACACTGGCTTAGATGGCCAGGGAAGTAAAATTCTGGTGAGAAAATTAGCAGAAAGCAAGTATCCTGTGGTTCGCTTATCTGAAATACCTGCTAAGCAGTTGGAAAATGATAAATCGGAGCACAAAAAAATTGTCATTAGACCTAGGCCTTCTAAAACTAGTTTAAATGAAGCCAGTGAAGCTGGGACAAAAGGAAACACACTGAGAAGTGTGGAAGAGAGAAAGGAGGAATATGATCGGGCTCGAGCACGTATTTTCAGTAGCTCTAGAAGCTTCGACTCAGGGGATACATCATCCCCAGTCCCCACAGATGTAAAAAATTCTCTCATCATTAAGGATGAGAATGAAGCTAGCAAGATCCCAATGGCTGATCCAGAAAGATGCAACAGTGTCAGGGACATTAGTTCTACCCGAGTTGCCATTTTGCGAGATAGGGAAAAGGATCGTAGCGATCCAGATTATGATCGTAGCTACGGAAGGTATGCTAGGAATATGCCGACATCTGCTGTTAACATGGTGCCTTTCAATTTGCCAAAAGCTCAACCTTCATTTGCTCAATATGATGCTACTTTTAATCCGTTGGGCCAGATGCCACAAACTCAGGCTTCACTTGGCTACGGTCCTCCGTCAAGCCCAATGATGAATCCTTTTGCTGCCAACGGATTAAATCAAACAGCTAGGGATGTTGCTTATGTACAATGGCCAAGTGCTGCAATGATGTATGCACATTCATATGACCAATTTAGGCATGCTGTTTTCCAGGCTCCGTTTGGTCAACAGCCGTTGAGCTTTGACTATTCACAAAACTACTAG 1059 0.4457 MDSSSISSNDVVSKESMVDPFLVEALQNPRHRLTILRMELDIQRFLNNADQQHFEFPHFPSSYLRLAAHRVAQHYGMQTMVQDTGLDGQGSKILVRKLAESKYPVVRLSEIPAKQLENDKSEHKKIVIRPRPSKTSLNEASEAGTKGNTLRSVEERKEEYDRARARIFSSSRSFDSGDTSSPVPTDVKNSLIIKDENEASKIPMADPERCNSVRDISSTRVAILRDREKDRSDPDYDRSYGRYARNMPTSAVNMVPFNLPKAQPSFAQYDATFNPLGQMPQTQASLGYGPPSSPMMNPFAANGLNQTARDVAYVQWPSAAMMYAHSYDQFRHAVFQAPFGQQPLSFDYSQNY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02516 352 Pfam SUZ domain 123 171 IPR024771 -
Adu10g02516 352 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 9 351 - -
Adu10g02516 352 SUPERFAMILY R3H domain 13 132 IPR036867 GO:0003676
Adu10g02516 352 MobiDBLite consensus disorder prediction 128 159 - -
Adu10g02516 352 PANTHER OS05G0411600 PROTEIN 9 351 - -
Adu10g02516 352 Gene3D - 6 133 IPR036867 GO:0003676
Adu10g02516 352 MobiDBLite consensus disorder prediction 134 148 - -
Adu10g02516 352 CDD R3H_encore_like 31 97 - -
Adu10g02516 352 Pfam R3H domain 34 85 IPR001374 GO:0003676
Adu10g02516 352 SMART R3H_4 16 98 IPR001374 GO:0003676
Adu10g02516 352 ProSiteProfiles R3H domain profile. 32 99 IPR001374 GO:0003676
Adu10g02516 352 ProSiteProfiles SUZ domain profile. 102 172 IPR024771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02516 Adu-Chr10 101560509 101563957 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02516 - - gmx:100814835 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02516 10 101560509 101563957 Adu10g02516 10 101560509 101563957 ECH