Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02342 ATGACCTCGAGTATTAATTTTACCTTCGTCTCTTGGTCTCACGTTCTAAACGAAGCGAAACGACGAGTTCAAGACTGCGTTGAAGCGTCAACACCCTTTTCTGCCTTCTGCTGGTATCAAGATTTTGATCTGATGGCTGGCCATAGGAGCAATTATGGTAAGCGTCCCCGTCCGCATTCTGACTATGAAAATGGAGGAAATAAGAGGAGGAATGCAGGTGATGACAGAGAGCAGTTTGTGATTGATCCAGAAGACACTGTGTATCGCTATTTGTGCCCTGCCAGAAAGATTGGCAGTGTCATTGGTAGGGGAGGTGAGATTGTTAAGCAATTGAGGATAGACACTAAATCGAAGATTAGGATTGGTGAGACTGTATCGGGTTGTGATGAGCGAGTCGTTACTATCTACAGTGTCAGCGATGAGACTAATGCTTTTGAGGATAGTGGCAATTACGTGTCTCCTGCTATGGATGCTCTTTTTAAGATTCATGACAGAGTGATTGCTGAGGACTTACATGGTGATCTGGACGATGATATTGGTCACCAAGTACATGCTAAGCTGTTAGTTCCGTCTGATCAGATTGGTTGTGTCATTGGAAAAGGTGGGCAGATAGTACAGAGCATACGTAGTGATACTGGTGCACAGATTCGTATATTGAAGGATGAACATTTACCTTTGTGTGCCTTGAACTCTGATGAACTTGTGCAGATTTCTGGTGATGCTGCTGTTGTCAAGAAGGCTCTTTATCAAATTGCATCTCGACTTCATGATAACCCTTCAAGATCTCAGCATCTGCTTACTTCTGCTGTTCCGAGTGTATACCCTGCTGGTGGCTCACTTATGGGTCCAACTGCAGGGGCTCCAATTGTGGGGATAGCTCCTCTTATGGGTGCATATGGGGGGTATAAAGGGGAAGCAGGTGATTGGCCACGGTCCTTGTACTCAGCTCCAAGGGATGAAACATCTTCAAAGGAATTTTCTGTTCGATTGGTGTGTCCAATTGGTAACATTGGCGGTGTCATAGGAAAAGGCGGTGTTATAATCAATCAAATTAGACAAGAGTCTGGGGCAACAATAAAAGTTGATAGTTCAACAAGTGAAGCTGATGAATGCTTAATAACGATTGCAACAAAAGAGTTCTTTGAAGAAACATTTTCTCCAACAATAGGAGCAGCTGTGCGCTTGCAACCGCGTTGCAGTGAGAAAGTTGAAAGAGATTCGGGAATCATCTCTTTCACTACCAGACTGTTAGTGTCTACCTCTCGAATCGGTTGCCTTATTGGTAAAGGAGGATCTATCATAACTGAGATGAGAAGGCTTACAAAAGCTAACATACGTATCCTGTCAAAGGACAATCTTCCGAAAATTGCATCTGATGATGATGAAATGGTACAGATTTCAGGAGATCTTGATGTTGCTAAGGAGGCTCTTGTGCAAGTGCTTACACGGTTGAGAGCAAATATTTTTGATAGGGAGGGTGCCGTCAACACATTCCTTCCAGTCCTGCCATATGTTCCTGTTTCAGCTGATGGATCAGATGGCTATGATAGTAGAGAGGGTAAAAGACATGGGCGTGGACATTCATATTCAAGTGGATATGGAGGCTCTAGTGATTTAGCAGCTGGTGATGCATATGGAAGCTATGGAGGCTCACAGCTTGGTGGCAGCAGTCTCTATGGGGCTTATGGAAGTTATTCTTTGGGACGGCCTAGCACTGGGTTGTCTAGTCAGAGCAGTCTTTCTAGGAGGAGAAATCATGCTTATTAA 1767 0.4414 MTSSINFTFVSWSHVLNEAKRRVQDCVEASTPFSAFCWYQDFDLMAGHRSNYGKRPRPHSDYENGGNKRRNAGDDREQFVIDPEDTVYRYLCPARKIGSVIGRGGEIVKQLRIDTKSKIRIGETVSGCDERVVTIYSVSDETNAFEDSGNYVSPAMDALFKIHDRVIAEDLHGDLDDDIGHQVHAKLLVPSDQIGCVIGKGGQIVQSIRSDTGAQIRILKDEHLPLCALNSDELVQISGDAAVVKKALYQIASRLHDNPSRSQHLLTSAVPSVYPAGGSLMGPTAGAPIVGIAPLMGAYGGYKGEAGDWPRSLYSAPRDETSSKEFSVRLVCPIGNIGGVIGKGGVIINQIRQESGATIKVDSSTSEADECLITIATKEFFEETFSPTIGAAVRLQPRCSEKVERDSGIISFTTRLLVSTSRIGCLIGKGGSIITEMRRLTKANIRILSKDNLPKIASDDDEMVQISGDLDVAKEALVQVLTRLRANIFDREGAVNTFLPVLPYVPVSADGSDGYDSREGKRHGRGHSYSSGYGGSSDLAAGDAYGSYGGSQLGGSSLYGAYGSYSLGRPSTGLSSQSSLSRRRNHAY 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02342 588 PANTHER PROTEIN BTR1-LIKE 54 530 - -
Adu10g02342 588 SMART kh_6 181 256 IPR004087 GO:0003676
Adu10g02342 588 SMART kh_6 324 380 IPR004087 GO:0003676
Adu10g02342 588 SMART kh_6 410 485 IPR004087 GO:0003676
Adu10g02342 588 SMART kh_6 84 164 IPR004087 GO:0003676
Adu10g02342 588 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 176 259 IPR036612 GO:0003723
Adu10g02342 588 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 54 530 - -
Adu10g02342 588 ProSiteProfiles Type-1 KH domain profile. 85 152 - -
Adu10g02342 588 Pfam KH domain 88 140 IPR004088 GO:0003723
Adu10g02342 588 Pfam KH domain 328 375 IPR004088 GO:0003723
Adu10g02342 588 Pfam KH domain 186 252 IPR004088 GO:0003723
Adu10g02342 588 Pfam KH domain 413 480 IPR004088 GO:0003723
Adu10g02342 588 CDD PCBP_like_KH 87 163 - -
Adu10g02342 588 Gene3D - 325 487 - -
Adu10g02342 588 Gene3D - 84 263 - -
Adu10g02342 588 MobiDBLite consensus disorder prediction 569 588 - -
Adu10g02342 588 ProSiteProfiles Type-1 KH domain profile. 182 251 - -
Adu10g02342 588 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 322 376 IPR036612 GO:0003723
Adu10g02342 588 CDD PCBP_like_KH 413 481 - -
Adu10g02342 588 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 411 485 IPR036612 GO:0003723
Adu10g02342 588 MobiDBLite consensus disorder prediction 53 76 - -
Adu10g02342 588 MobiDBLite consensus disorder prediction 512 533 - -
Adu10g02342 588 ProSiteProfiles Type-1 KH domain profile. 325 375 - -
Adu10g02342 588 ProSiteProfiles Type-1 KH domain profile. 411 480 - -
Adu10g02342 588 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 81 137 IPR036612 GO:0003723
Adu10g02342 588 CDD PCBP_like_KH 184 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02342 Adu-Chr10 98722494 98728462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02342 K21444 - gmx:100804157 830.861