Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02087 ATGCTCTATCAGGTAGAGCTAGAGCTAGATGCTTCCCCAGGGATTTCAATTGAGGAGGTCCCCAATGGCGGCAAATTGTTGCAACGACTTGATCAACAAGTAATTGAACATCATCTATCTTATAATGTGATGCACGACACTTCTGGACCTGCATCCATTCGAATCAAGGCTCAGATTAGGGGTTTAGATGTTCAAGCTCTCATTGACGGGGGTAGCTCCGATAGCTTCATCCAGCCGCGCATTGCCAAGTTTTTAAACCTTCCGATTGATCCAGCTCCGGGTGTTCGTGTTATGGTGGGTAATTTCGCAATTATGGATGTAGAGGGGCGAATTTCCTCCCTGGAAGTGACATTGCAAGTTTGCAAGATTACCATTCCGGAGGTCTTTGTTCTCCATGTTGCGGGAGGAGATTTGGTGATAGGCACCCCGTGGTTGAGGACTCTGCGAGCTCATATTGTGGATTACGACGCTGCTTTTCTTCGTTTTTGGCACGAGGGACAGTTTGTGACAGTGCAGGGTGAGACTTCTTCAGCCCTGTCTCAAGCTCAATTTCACCATATTGGGCGATTGGTCAACACCGACGCCATAGCGGAGGCATTCACGGTTCAACTTCAGCAAAGTGATGAGAGAGCAGAAACACTTTTACAGCTTCCGGAAGGGTTGAACCTAGAGTTAACCATCCTTCTCCACACTTGTGGCACAGTTTTTGCTCAACCCAAGGGACTGCCACCACAACGGGCGCATGATCATTTGTTTCCTCTGACTAAGGGTGCCGAACCGGTCAAGTCCGGGTATCATCAAATCTTGGCGAGACCCGAGGATAGGCACAAGACAGCATTTCGCACCCACCAAGGCCTTTACAAGTGGCTTTTAATGCCGTTTGGACTTACCAATGCCCCAGTGACCTTCCAACATTTGATGAATGATGTCTTTCGGCCTCACTTACGGAAGGTTTATAATGATGAGGAAGAATGGTTTCGTTCAATATTTGGTAAGTCTAAGAAAGAAGAAGCAATTCAAAATCAATACGAGTTTCTTGTTCAAAGAATGGGTGGTCCTATTCTCTACTCTCAGAGAAGAGGGCATCCTGCTCTAATAGCTAGGCATGGAGCATTTGATGTGACACATGAAGCTGCAGAGAGGTGGCTACATCACATGCAACAGGCATTAGATTCCACTTCCGACATTGATGATGAATCTAAGATCAAACTCATCAACTTCTTCAGGCACACTGCTTATTTTCTTGTAGCGGGAGTTGAGTCAAGGAATCAGAACCAAATGCCATGCAAGAATGCATCTGGAAGTCATCCATCACCGTCGCGCAGTTTGTGCCGTTTCCACAGTCCCGCATCACGCCAGTCGTGCAGCCCCTCCCCTGCGCCGACGGTTTCTCCCTCCCAACGTCTCTCTCACACTCCTTCTTGCTTTGCAACCAGTGCCGTCTCACTCTCCACCTCCTACGACAAGATGACCTACCCCCGCGCCCGATCTAGCTCCCACATATGCCCCACTCTCCGCTGGTACGACCTCGTCGCCCTCAGCATTGGCAGCATGGTTGGCGCCGGCATCTTCATCACCACTGGACATGCTACTCATCTCTACGCTAGTCCCGCCGTTGTCCCCTCTTACACAATTGCAGGCCTCTGCGCTGTTCTCTCCCCCATCTTGCGCTTGACAACAGGAATCAAgaggaaggtggacgacaAGATTGAATTGGAGTCAGGAGCAAAGTCGCCTGCCTCAACACCATATAGGATGGCACTGCTAGAACTTGAGGAGTTGAAGAAAGTCAAGTGGTTCTCAAAGCTGGATTTGAGGTCAAGATATTACCAAGTGAGGATTGCCGATGGTGATGAGCCTAAGACCACGTGTGTCATAAGGTTTGGATCGTATGAGTGGTTGGTAATGCCTTTTAGCATGACTAATGCTCCTGCGACCTTCTGTACCTTGATGAACGAGATCTTTCGACCTTACCTTGATCGGTTTGTAGTGGTCTACTTGGATGATATTGTTGTCTATAGCAATACTTTGGAAGAACATGTAGAACACTTACGAACCGTGTTTAAGATCTTGCGAGAGAATAACCTATATGTGAAGAAGGAAAAGTATTCCTTTGCAAGGAATGAAGTCCACTTCTTCGGACATATCATTAAAGATGGAACTCTCTGCATGGATTAA 2178 0.4738 MLYQVELELDASPGISIEEVPNGGKLLQRLDQQVIEHHLSYNVMHDTSGPASIRIKAQIRGLDVQALIDGGSSDSFIQPRIAKFLNLPIDPAPGVRVMVGNFAIMDVEGRISSLEVTLQVCKITIPEVFVLHVAGGDLVIGTPWLRTLRAHIVDYDAAFLRFWHEGQFVTVQGETSSALSQAQFHHIGRLVNTDAIAEAFTVQLQQSDERAETLLQLPEGLNLELTILLHTCGTVFAQPKGLPPQRAHDHLFPLTKGAEPVKSGYHQILARPEDRHKTAFRTHQGLYKWLLMPFGLTNAPVTFQHLMNDVFRPHLRKVYNDEEEWFRSIFGKSKKEEAIQNQYEFLVQRMGGPILYSQRRGHPALIARHGAFDVTHEAAERWLHHMQQALDSTSDIDDESKIKLINFFRHTAYFLVAGVESRNQNQMPCKNASGSHPSPSRSLCRFHSPASRQSCSPSPAPTVSPSQRLSHTPSCFATSAVSLSTSYDKMTYPRARSSSHICPTLRWYDLVALSIGSMVGAGIFITTGHATHLYASPAVVPSYTIAGLCAVLSPILRLTTGIKRKVDDKIELESGAKSPASTPYRMALLELEELKKVKWFSKLDLRSRYYQVRIADGDEPKTTCVIRFGSYEWLVMPFSMTNAPATFCTLMNEIFRPYLDRFVVVYLDDIVVYSNTLEEHVEHLRTVFKILRENNLYVKKEKYSFARNEVHFFGHIIKDGTLCMD 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02087 725 CDD retropepsin_like 55 146 - -
Adu10g02087 725 Pfam Bacterial-like globin 314 413 IPR001486 GO:0019825
Adu10g02087 725 CDD TrHb2_AtGlb3-like_O 317 417 - -
Adu10g02087 725 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 587 717 IPR000477 -
Adu10g02087 725 Gene3D HIV Type 1 Reverse Transcriptase, subunit A, domain 1 221 305 - -
Adu10g02087 725 MobiDBLite consensus disorder prediction 427 471 - -
Adu10g02087 725 Gene3D Amino acid/polyamine transporter I 504 555 - -
Adu10g02087 725 Gene3D Globins 306 422 IPR012292 GO:0019825|GO:0020037
Adu10g02087 725 SUPERFAMILY Globin-like 316 416 IPR009050 -
Adu10g02087 725 Gene3D Acid Proteases 34 171 IPR021109 -
Adu10g02087 725 Pfam Aspartyl protease 55 142 - -
Adu10g02087 725 SUPERFAMILY Acid proteases 54 152 IPR021109 -
Adu10g02087 725 Gene3D - 577 720 IPR043128 -
Adu10g02087 725 PANTHER TRANSPOSON TY3-I GAG-POL POLYPROTEIN 38 261 - -
Adu10g02087 725 PANTHER TRANSPOSON TY3-I GAG-POL POLYPROTEIN 591 668 - -
Adu10g02087 725 PANTHER TRANSPOSON TY3-I GAG-POL POLYPROTEIN 262 314 - -
Adu10g02087 725 PANTHER - 38 261 - -
Adu10g02087 725 PANTHER - 591 668 - -
Adu10g02087 725 PANTHER - 262 314 - -
Adu10g02087 725 SUPERFAMILY DNA/RNA polymerases 560 725 IPR043502 -
Adu10g02087 725 SUPERFAMILY DNA/RNA polymerases 261 319 IPR043502 -
Adu10g02087 725 CDD RT_LTR 249 336 - -
Adu10g02087 725 CDD RT_LTR 591 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02087 Adu-Chr10 92592404 92618135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02087 469 553 Organic Solute Cotransporters AT2G34960 41.176 7.60e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02087 - - ahf:112716183 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02087 10 92592404 92618135 Adu10g02087 10 92592404 92618135 ECH